Methylophaga marina: GCM100_11160
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Entry
GCM100_11160 CDS
T09183
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmaf03000
]
GCM100_11160 (slmA)
03036 Chromosome and associated proteins [BR:
mmaf03036
]
GCM100_11160 (slmA)
Transcription factors [BR:
mmaf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
GCM100_11160 (slmA)
Chromosome and associated proteins [BR:
mmaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
GCM100_11160 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
TetR_C_13_2
HTH_20
TetR_C_15
GCP_C_terminal
HTH_22
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BDZ73397
LinkDB
All DBs
Position
complement(1094139..1094756)
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AA seq
205 aa
AA seq
DB search
MSEAVQTSRAETKRSRRQDILEALASELEQRPGQRITTAKLAASLGVSEAALYRHFPSKA
RMFEGLIGFAEDTVFGLIQRILQDEQNALHRIEKIMTLLLGFSTKNPGITSVLMGAALTG
ETERLRQRVSQFFDRLETQFRQILRERELTLTQAGGRPVNETANLLLAVVEGQMQQYVRS
SYRQSPLIGWDQKWQLLAKMLEVYA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggctgtgcaaacgagtagagctgaaacaaaacgttcacgacgtcaggatatt
ctggaagcgcttgcatcagaactagaacagcgtcccggacaacgtatcacaaccgctaag
ctcgctgcgagtttaggcgtgtctgaagcggctctttatagacattttccaagtaaagcc
aggatgtttgaaggtttaattggtttcgctgaagacacggtgtttggcttgattcaacgt
attttgcaagacgaacaaaatgcgttgcaccgtattgagaaaatcatgacgcttctgctt
gggttttcaaccaaaaatccggggatcaccagtgtattaatgggcgcagctttaaccggg
gaaacagaacgattaagacagcgagtgagtcaattttttgaccgtttagaaacgcagttt
aggcagatccttagagagcgcgagttgacgttgactcaggccggaggaaggcctgtaaat
gaaacggctaatttactacttgctgtggtggaaggtcagatgcagcaatatgtgagaagt
agttaccggcaatcaccgcttattggttgggatcaaaaatggcagttattggcaaaaatg
cttgaggtttatgcatga
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