Methylophaga marina: GCM100_12400
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Entry
GCM100_12400 CDS
T09183
Symbol
ispB
Name
(GenBank) octaprenyl-diphosphate synthase IspB
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00900
Terpenoid backbone biosynthesis
mmaf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GCM100_12400 (ispB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mmaf01006
]
GCM100_12400 (ispB)
Enzymes [BR:
mmaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
GCM100_12400 (ispB)
Prenyltransferases [BR:
mmaf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GCM100_12400 (ispB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDZ73521
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All DBs
Position
1214671..1215639
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AA seq
322 aa
AA seq
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MDIQSIYSLIQDDMKAVDELIQQRLQSDVALINQLGFYIINSGGKRLRPAIAILSARACG
YEGSQHINLATIIEFIHTATLLHDDVVDNSDMRRGQETANSLWGNEASVLVGDFLYTRSF
EMMVEIESMRLMQILSHTTNVIAEGEVLQLLNCHDADTTEARYLEVIHHKTAKLFEAAGQ
LGAVISGSEPHIETAMANYAMHLGSAFQLVDDLLDYSQSSETIGKNIGDDLAEGKPTLPL
IYAMQHGNAEQAAIIREAIENGQRDRITEIIQIIQETGAIDYTAKAAEQEVKQAKDSLDL
LVDSEYKQALLSLADFSVQRDY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtggatatccaatccatctattctttaattcaagatgacatgaaagctgtagacgagttg
atccaacaacgcttacagtcagatgttgctctcattaaccaacttggcttttatattatc
aatagtggcggtaaaaggcttcgccccgccatcgctatattatccgccagagcatgtggc
tatgaaggtagccaacacattaatcttgccaccattatcgaattcattcacaccgccacc
ttattacatgatgacgtcgtggataattctgatatgcgtcgcggccaggagacagcgaac
tctctgtggggaaatgaagccagtgtattggtcggtgactttctctacactcgatccttt
gaaatgatggtcgaaattgaatcaatgcgattgatgcaaattctctctcatacgacgaat
gtcattgctgaaggcgaggtactgcaactattaaattgtcacgatgcagatactaccgaa
gcacggtatcttgaggttatccatcataaaaccgcgaaattattcgaggctgctggccag
ttaggtgcagtcatctctggctctgagccccatattgaaaccgcaatggccaattacgcc
atgcacttgggcagcgccttccaattagtggatgacttactggattacagccaatccagc
gagactattggtaaaaatatcggcgatgatcttgcagaaggcaaacccactttaccactg
atatacgccatgcagcatggcaatgcagagcaagcagccattattcgagaagcgatagaa
aatgggcaacgggatagaatcactgaaatcatccagatcattcaagaaaccggcgccatt
gactacacagcgaaggcagcagaacaggaagttaagcaagctaaagattcactcgacctg
cttgtagatagtgaatataaacaagcactattatcgttagctgacttttcagtacagcgc
gattactaa
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