Methylophaga marina: GCM100_12610
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Entry
GCM100_12610 CDS
T09183
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00550
Peptidoglycan biosynthesis
mmaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCM100_12610
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mmaf01003
]
GCM100_12610
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmaf01011
]
GCM100_12610
Enzymes [BR:
mmaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
GCM100_12610
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GCM100_12610
Glycosyltransferases [BR:
mmaf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GCM100_12610
Peptidoglycan biosynthesis and degradation proteins [BR:
mmaf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
GCM100_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
BDZ73542
LinkDB
All DBs
Position
1234429..1236690
Genome browser
AA seq
753 aa
AA seq
DB search
MLKIAFTLLVLLGLLTLFLDVQIRSQFEGKRWAVPAKVYARPLELYAGAPLSLSDLKIEL
KGLGYQFRSKAAQPGQAAFSSSKAIIATRGFRFSDGMEPARKLILDFNAEGVTRLRDYQG
QDVPLVRLEPVLIGGIYPLNNEDRDLIQLKDAPPMLSEALIAIEDRDFYQHHGISPKGIA
RAMVANIKAGSFVQGGSTLTQQLIKNFYLTSDRSLVRKLLEIPMALLLELHYDKDDILEA
YLNEVYLGQDGARAIHGFGLGAHYFFAQPLQELKLHQLALLAGLVKGPSYYDPRRHPERA
KNRRNLVLKVLYEQDKITQQQYQQARNANLDVVEKGTLLKEAYPAFLDLVKRQLRRDYRD
EDLNSEGLRVYTSLDPITQRHAESSLKSTIASLQQHHGSKLKSLQGSMVVTDPQTGEVLA
VIGDKNTRYKGFNRALDSVRPIGSLVKPAVYLTALEQGKTLASMVDDSSFTLTLPNGQTW
KPQNFSKQSHEDVLLIDALAHSYNIATVRLGMEAGLDEVINTLNRLGIKRQLDAYPSLLL
GAQGLSPLEVATMYQTIAANGFQTPARAIRTVTDSQGEALSSYPFQLRQTIDADDVYLIQ
TAMQEVTHSGTAASIYSSLPSHINTAGKTGTTDDQRDSWFAGFSNNRLAVVWLGQDDNSP
LPFTGSGGALRVWKNFMRSQPLESFEAPLPDDIKWLWIDTQTGFLSAQECEHSRQLPFIS
GTEPVEMSECVTQPGQQSNPVTRSLDWIKDWFQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaaaattgcttttactctactggttctacttggattattaaccctattccttgat
gttcagattcgtagtcagtttgaaggcaagcgctgggctgttcctgccaaggtatatgct
cgcccattagagttgtatgctggggctccgctctcactctccgacctgaaaattgaatta
aaagggttagggtatcaatttcgttcaaaagccgcacagcctggccaggccgccttctcc
tcatcgaaggccatcatcgccactcgtggctttcgttttagcgatggcatggagccggca
agaaaactcattctcgactttaatgctgaaggtgtaacacgcctaagagattatcaaggt
caggatgtgccactggttcgccttgaacctgttctgataggaggcatctacccacttaat
aatgaagaccgggatcttattcagttaaaagatgcccctccgatgttgagcgaagcttta
atcgctatcgaagacagagatttttaccagcatcatggcatctcccccaaaggcatagcc
cgagctatggttgccaatattaaggctggtagttttgttcagggcggtagtaccctgact
caacagcttattaagaacttctatctcacctctgaccgtagtctggttagaaagctactc
gaaattccgatggctttattgttagagctgcactacgacaaagatgacattttggaagcc
tatctgaatgaagtctatctgggacaagatggcgcacgagccattcatggttttggtttg
ggtgcacattactttttcgcacaaccgctacaagagttaaaactgcatcagttagcatta
cttgccggcctagtgaaggggccttcttattacgacccaagacgccaccctgagcgggca
aagaatcgacgcaatctggtgctaaaagtgttatatgagcaagataaaattacacaacaa
caatatcagcaagcgagaaacgccaaccttgatgttgtcgagaaaggtacacttttaaaa
gaagcgtatccagcctttttggacttagtgaaaagacagttacgtcgtgattatcgtgat
gaagatctgaactcagaagggctacgggtctataccagcctggatccgatcactcaacgt
catgctgagtcatctttaaaatccaccattgcgagtctgcaacaacaccatggctctaaa
ttaaaatcgctacagggcagtatggtagtgacagacccacaaacgggtgaagtcctagcg
gtcatcggtgacaaaaatacacgttataaaggctttaatcgcgcattggactctgtacgc
cccatcggctcgttggtaaaacctgccgtgtatttaacagccttagaacaaggtaaaaca
ctggccagtatggtggatgattcaagcttcactctgacacttcccaatggtcaaacatgg
aaaccacaaaacttcagcaaacaatcccatgaggatgttttactgattgatgccttagcc
cactcttacaacatagctaccgttcgccttggaatggaagcaggtttggatgaggtcatt
aatacgttgaaccgattaggcattaaacgtcagctcgatgcctacccctcgctcttatta
ggtgctcagggcttatctccgcttgaagtcgcgacaatgtatcaaaccattgctgccaat
ggttttcagacccctgcccgagctattcgcacggtcacagacagtcaaggtgaagcgcta
tccagctatccattccaactgcgtcagactatcgatgcagatgatgtttatctgattcaa
acagccatgcaagaagtcactcacagtggcacggctgccagcatttactccagcttaccc
agtcatatcaatactgccggtaagacgggcacaaccgatgatcaacgagatagctggttt
gcgggtttcagcaataatcgtctcgccgtggtatggcttggtcaggatgataattccccc
ttaccattcaccggttcaggcggagcgttgcgtgtctggaaaaactttatgaggagtcag
cctctggaatcgtttgaggcaccattgcctgacgatataaaatggctctggatagacaca
caaacgggctttttatccgctcaagaatgtgaacattcccgacaactgcctttcatctcg
ggaacagagcctgtcgagatgtctgaatgtgtcactcagccaggacagcaatctaatccg
gtgactcggtcactggactggattaaagattggtttcaataa
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