Methylophaga marina: GCM100_15300
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Entry
GCM100_15300 CDS
T09183
Symbol
dctD
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K13599
two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
mmaf
Methylophaga marina
Pathway
mmaf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCM100_15300 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mmaf02022
]
GCM100_15300 (dctD)
Two-component system [BR:
mmaf02022
]
NtrC family
NtrY-NtrX (nitrogen regulation)
GCM100_15300 (dctD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Sigma54_activ_2
Sigma54_activat
HTH_8
AAA_16
UPF0175
AAA
AAA_7
DUF815
BRCA2DBD_OB2
VpsR
Motif
Other DBs
NCBI-ProteinID:
BDZ73811
LinkDB
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Position
complement(1479900..1481174)
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AA seq
424 aa
AA seq
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MSNDKPLILVVDDEPDIRELIKDILEDENYHVRIAADGQEAQQVFSEEQPDLILLDIWMP
DIDGISLLKEFKQQNKSVTIVMMSGHGTIETAVEATRLGASDFIEKPLSTAKLLRGVEQA
LENREKQAIIQRELAQAPVGKSHQIKLLREQVERVAKHEMPILLVGEPGTGKHCFSHYLH
SLGQYAGGKFIEVSPESFPLDSLKAVTLAKNNCLFINDLALLSDEAQALLLHLLESNKLE
HCQLICATQYSLQKAVDNGDFLESLLYQLNSITLVVPPLRDHIEDIPELVHHFVDTQTTR
SGLPYRRFTVAAQNRLRNHDWSGNVLELKNVIQRLLVLGNGEDIDVADVDMALASEAEAI
ENGDETINFDLPLREAREQFERIYLLQKLQETDGNVGKAAKLAGMERTHLYRKLRSLGID
TKQI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaacgataaaccactgattcttgttgtagatgatgaaccggatatccgcgagctc
atcaaagacattctggaagacgaaaactatcacgtcagaatagccgctgatgggcaagaa
gcacagcaagtctttagtgaagaacaaccagacctaatcctgctggatatctggatgcca
gatattgatggcatcagtttgctgaaagagttcaaacaacaaaataaaagtgtcacgatt
gtgatgatgtcaggtcatggcaccatcgaaacagctgtggaggcaacccgtttaggcgca
agtgattttatcgagaaaccgctatctaccgctaagttacttcgaggcgtcgaacaggca
ctggaaaatcgagaaaaacaagcgattattcaacgggaattagcacaagcaccggttggc
aaaagccatcaaatcaaactattacgagaacaggttgaacgggttgctaaacatgaaatg
cctattcttctggtgggcgaaccaggcacaggtaaacattgtttctctcattacctacac
agcctgggacaatacgcagggggtaagtttattgaagtcagccctgaaagttttccttta
gatagtctcaaggctgtcacgctggctaaaaacaactgtctgtttatcaatgatttggca
ttgttgagtgatgaagcacaggcactattattacaccttcttgaaagtaataaacttgaa
cactgtcaactcatctgtgcaacacaatattccttgcagaaagcggttgataatggtgat
tttctggaaagtctcctgtatcagctcaacagcatcacattggtagttccacctttacgt
gatcatattgaagatatccctgagttggtacaccattttgtggatacacagacaacacga
tctggcctgccatatcgacgttttaccgtggcagcgcaaaaccgccttagaaatcacgac
tggtcagggaacgttcttgaactcaaaaatgtgattcaacgcttgcttgtcttgggcaat
ggtgaagatattgatgtcgccgatgtcgacatggcacttgcctcggaagcagaagccatt
gaaaacggcgatgaaactatcaattttgacttgccacttcgcgaggccagagaacagttt
gaacgtatttacttgctgcaaaaattacaggaaaccgatggtaatgtcggtaaagccgcc
aaattggcgggtatggaaagaacccatctttatcgaaagcttcgctctctcggtattgat
accaaacagatttag
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