Methylophaga marina: GCM100_16210
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Entry
GCM100_16210 CDS
T09183
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmaf02000
]
GCM100_16210
Transporters [BR:
mmaf02000
]
Other transporters
Pores ion channels [TC:
1
]
GCM100_16210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
BDZ73902
LinkDB
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Position
1573639..1576041
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AA seq
800 aa
AA seq
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MSYLKTSRPHRHVFKTLPLSMMMAVAIGSAVVTTPFQVHAENVQATTQAFNIPAGPLDQV
LNRFALAANIDLSVNSQITANKRSRGLDSTVDVQTGLQRLLSPHGLVAVKTSATSYTVKQ
ITDGSEDGVDLPVVNIDAEGMRETATSSVDGYLATRSASATKTDTPLIETPRSVTVVTAD
QIKDRKVQTVEDAVAYAAGVQIGGSGYDPRFDQITIRGYEVTTNADYRDGLRQTNTGWLS
YFRTEPYGLERIEVVKGPDSVLFGQISPGGLVNRVSKRPTTETIREVEIQAGTDDHYQGQ
FDFAGKLGETNEWTYRVVGLARNSDSDIRGVIDDNVYFAPSLTWRPNDDTSLTLLAQRQR
YETAGSPRPFQLPSGELTDFWSGDEDFDKLLQTQTSIGYEFEHRFNDTFTVRQNARYSYI
DTTNQYTSSSLDADGHTLNRTATGVYEDMHNTAIDTAVESHFSTGQLTHTLLTGLDFYQV
NSRVKYAYGDALSIDMWNPDYHQSIAKPSTLYSFGNTQTESEQFGLYVQDQISIDKWRVT
LGLRHDWVDKDSYNYFSGIWTDIDDEKTTGSAGVLYAFDNGISPYISYATSYIAQFSTNA
YGSNYKPTEGEQWEAGIKYQPVGYQSFFTASVFNLIESNVLTQDPNNINNSIQKGERRVQ
GLELEANMNFDFGLNLVASYTYQDAKITESNDGDEGNQFTGVPRHLASFWGNYDVTHDLQ
AGLGVRYVGESYSNTQNTDKNESYSIVEARTSYSLDQWVRGATLAVNASNLFDKEYEVCE
AGYCYRGIGRKVIASFNYNW
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctgaaaacatcacgtccacatcgacacgtatttaaaaccttgcctctcagc
atgatgatggctgtggctattggttcagctgttgttactacacctttccaagttcatgct
gaaaatgttcaggccactacacaggcctttaatattccggctgggccacttgatcaagtg
cttaatcgctttgctttggctgcgaatatcgatctgtcagtgaactcacaaatcacagcc
aataaacgcagccggggtctggattccactgttgatgtgcaaacgggcttacagcgcttg
ttatcaccgcatggcttggtcgccgttaaaacatcagcaaccagctataccgttaaacaa
atcacagatggctcagaagacggtgtagatttacccgtggtcaacattgatgctgaaggc
atgagagaaacagccacaagttcagtggacggctatttagccacacgcagtgcctcagcc
acgaaaaccgatactccactaattgaaacacctcgctctgtaacagtggtaaccgctgat
caaattaaagatcgcaaagtgcaaaccgttgaagatgccgtggcctatgctgcgggtgtt
caaataggtggttcgggttatgacccacgctttgatcagattacgattcgtggatatgaa
gtgacgaccaatgctgattatcgtgatggtttacgtcaaaccaacaccggctggttatcg
tatttcagaactgaaccctatggtttggagcgtattgaagtcgtgaaagggcctgactct
gttttattcgggcagatcagccctggtggattggtcaaccgtgttagcaaacgccccaca
acagaaaccattcgcgaagtagaaattcaagcgggaacggatgaccactatcaaggccaa
tttgattttgccggtaaattgggggaaaccaatgagtggacctatcgtgtagtcggcttg
gcccgtaacagtgattccgatatccgcggtgtgattgatgataatgtctacttcgcacca
tctctcacatggcgtcctaatgacgataccagcctgacattgttagctcagcgtcaacgt
tatgaaacagcagggtccccacgtccattccagctaccttctggtgaactgacggatttc
tggtcgggtgatgaagacttcgacaagcttctccaaacacaaacctctattggctatgag
tttgaacatcgcttcaatgacacattcaccgtcagacaaaacgccagatatagctatatt
gatactaccaatcaatacacaagttcatcattagatgcggatggtcatacactcaaccgt
acagcaacgggcgtttatgaagatatgcacaacaccgccattgataccgccgtggaaagt
catttttccaccggtcagctgacgcatacattactcaccggtttggatttttatcaggtt
aatagccgagtgaaatatgcctatggcgatgcactatcaatagatatgtggaatccggat
taccatcaatctattgctaagccatccacactgtactcattcggtaatacccaaacggaa
agtgaacagtttggtctgtatgtgcaggaccagatcagtatcgacaaatggcgtgtgacg
ttagggctgcgtcatgattgggtggataaagactcatacaattacttcagtggtatttgg
acagacatagatgatgaaaaaaccacgggtagtgccggtgtgttgtatgcatttgataac
ggtattagcccatacatcagctatgcaacgtcatacattgcacagtttagtaccaatgct
tacggctcaaactacaaaccaacagaaggcgagcagtgggaagcggggattaaataccag
ccagtcggctatcagagtttcttcacggccagcgtgtttaacttgattgaaagcaatgtg
ctgacacaagatcctaacaacattaacaatagcattcagaaaggcgaacgccgtgtccaa
ggcttggagttagaagccaatatgaactttgattttggcctgaacctagtggcgagctat
acctatcaagacgccaaaatcaccgaaagtaatgacggtgatgaagggaatcaatttact
ggtgtgccaagacatctcgcttccttctggggtaactatgatgtgacccatgacctgcaa
gctggattaggtgtccgttatgtaggtgagtcatacagcaatacacaaaataccgataaa
aatgaatcttactcgattgtagaagcaagaacgtcttatagtctggatcagtgggtgagg
ggagcaacacttgctgtgaatgcctctaacttgttcgataaagaatatgaggtgtgtgaa
gctggctactgctatcgaggcatcggtcgtaaagtcatcgccagctttaactacaactgg
taa
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