Methylophaga marina: GCM100_17110
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Entry
GCM100_17110 CDS
T09183
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf03030
DNA replication
mmaf03430
Mismatch repair
mmaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM100_17110 (dnaN)
03430 Mismatch repair
GCM100_17110 (dnaN)
03440 Homologous recombination
GCM100_17110 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmaf03032
]
GCM100_17110 (dnaN)
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_17110 (dnaN)
Enzymes [BR:
mmaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM100_17110 (dnaN)
DNA replication proteins [BR:
mmaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM100_17110 (dnaN)
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM100_17110 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DUF4139
Motif
Other DBs
NCBI-ProteinID:
BDZ73992
LinkDB
All DBs
Position
complement(1653991..1655094)
Genome browser
AA seq
367 aa
AA seq
DB search
MQFTVSQDTLVRPLQLVCSIVERRATLPILSNVLLRVQGDQLSMTSTDMELEMIATLPVA
VEEEGKTTVSARKLLDIVRALPGNATISVNASEGKAVVKAGKSRFSLATLSSDDFPDSEG
ANYMDEISLPQSALKSLLDETSFAMASQDVRYYLNGLLLERDDTTLRAVATDGHRLALGS
LTTSTPVSEKNSVIVPRKAIIELGRLLNDSDDTVKVAFSNQQIKVELPDIHFTSKLIDGQ
FPNYERVLPLGGDKEVLADRDELKQALSRAAILSNDKHRSVRINLETDQLKATVTNQEQE
SAEEEISVDYKGAPLEIAFNNAYLLDLLNAIPDNQVKLLFTDETSSALVTPADEKFERQY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttactgtcagccaagatactttagtgcgaccgctgcaactggtgtgcagtatt
gttgaacgacgcgctacgcttccgatcctgtctaacgtcttattacgtgttcaaggtgac
cagctatccatgaccagcaccgatatggaactggaaatgattgctactctgccggtcgcc
gttgaagaagaaggcaaaaccaccgtctcagcccgtaaactgctggacattgtcagagcc
ctacctggtaacgccaccatcagtgttaatgccagcgaaggtaaagcagtggtgaaagca
gggaaaagccgcttttcattagccacattgtccagtgatgactttccggatagtgaaggc
gccaattacatggacgaaatttcactgccacaatcggcactgaaatccttactcgacgaa
accagctttgccatggccagtcaggatgttcgttattacttgaatggattactgctggag
cgtgatgacactacattacgtgctgttgcgaccgatggtcaccgtctggcgctgggcagc
ctgacgacatccacacccgtcagtgagaaaaacagcgtgattgtgccacgtaaagcgatt
attgaacttggccgcttgcttaatgacagtgatgatacggttaaagttgccttcagtaat
cagcaaatcaaagtggaattaccggatattcacttcacatctaaactcattgatggccag
ttcccgaactacgaacgcgttttgcctttaggtggcgataaagaagtcctggctgatcgt
gatgaattgaaacaagccttatctcgcgcagctattttgtctaatgataaacatcgcagc
gtgcgtatcaatttagagacagatcaattaaaagccacagtcactaaccaggaacaagaa
tccgcagaagaagaaatcagcgtcgattacaaaggtgccccattagaaatcgcctttaat
aatgcctatctgctggacttactgaacgcgattccggataaccaagtgaaactgcttttc
actgacgagaccagcagtgccctagttacacctgctgatgaaaaatttgagcgtcaatat
gtcgttatgccaatgcgcttgtag
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