Methylophaga marina: GCM100_17370
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Entry
GCM100_17370 CDS
T09183
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmaf03000
]
GCM100_17370 (fis)
03036 Chromosome and associated proteins [BR:
mmaf03036
]
GCM100_17370 (fis)
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_17370 (fis)
Transcription factors [BR:
mmaf03000
]
Prokaryotic type
Helix-turn-helix
Other families
GCM100_17370 (fis)
Chromosome and associated proteins [BR:
mmaf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GCM100_17370 (fis)
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GCM100_17370 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
HTH_28
Xre-like-HTH
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
BDZ74018
LinkDB
All DBs
Position
complement(1680767..1681057)
Genome browser
AA seq
96 aa
AA seq
DB search
MTQPLAKDKTTCAELAVAAEQTTAPLSVCVSRALADYFEQLEGHPAANLYEMLMTEVEVP
LLKATLEHTNGNQSRAAEILGINRGTLRKKLKQYGL
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaccgctagccaaagataaaacaacatgcgcagagctagctgtcgcggctgag
cagacaacggcgccacttagtgtgtgtgtatcacgtgctctggccgattattttgagcaa
ctcgaaggccatcctgcggccaatttgtatgaaatgttaatgacggaagtcgaagtgcct
ctgcttaaagcaacactagaacataccaatggtaaccaaagccgtgcagcggaaattctc
ggtattaaccgtggcacattacgtaaaaaactcaagcaatacggcttataa
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