Methylophaga marina: GCM100_18350
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Entry
GCM100_18350 CDS
T09183
Symbol
ruvA
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
mmaf
Methylophaga marina
Pathway
mmaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM100_18350 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_18350 (ruvA)
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM100_18350 (ruvA)
RecFOR pathway proteins
GCM100_18350 (ruvA)
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
HHH_3
Transposase_20
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BDZ74116
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Position
1787093..1787689
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AA seq
198 aa
AA seq
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MIGRLRGIIIEKQPPELVLDVHGVGYELSAPMSTFFNLPAVNEEVMLFTHMVVREDAQLL
YAFATERERLLFRSLLKVNGVGAKLALTILSGSDVDTFARSVQEGDTASLTRLPGVGKKT
AERLIVEMRDRLKEVSSAMGIDTIVSDMPMTTAGAKSEAVEALVALGYKPNEADKMLRSF
DSEGMTTEQIIRQALQRN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgattggacgtttgcggggcattattatagaaaagcagccaccagagcttgttctggat
gtgcatggcgttggttatgagttatctgcacctatgtcgactttcttcaatttacctgct
gtaaatgaagaagtgatgcttttcacgcatatggtcgtcagagaagatgctcagctttta
tatgcctttgctacggaacgtgagcgtttactctttagaagtctgttgaaagtcaatggc
gttggcgccaagcttgccttaacgattctttctggcagtgatgtggatacttttgcccgt
agtgtgcaggaaggggacactgccagcctgacaagactacctggtgtggggaaaaagacc
gcagaaagactcattgttgaaatgcgtgatcgactcaaagaggttagttctgccatgggt
attgataccatcgtttcggacatgccaatgacaacagctggggctaaaagtgaagccgtt
gaagcactggttgcattaggttacaagcctaatgaagccgataaaatgttgcgtagtttt
gatagtgaaggcatgactacagaacaaattattcgccaggcattgcagagaaactga
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