Methylophaga marina: GCM100_21580
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Entry
GCM100_21580 CDS
T09183
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM100_21580 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmaf01007
]
GCM100_21580 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmaf03016
]
GCM100_21580 (lysS)
Enzymes [BR:
mmaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GCM100_21580 (lysS)
Amino acid related enzymes [BR:
mmaf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GCM100_21580 (lysS)
Transfer RNA biogenesis [BR:
mmaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GCM100_21580 (lysS)
Prokaryotic type
Other AARSs
GCM100_21580 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDZ74439
LinkDB
All DBs
Position
2104220..2105713
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AA seq
497 aa
AA seq
DB search
MTNETELDENRLIAQRREKLAELREQGNAFPNDFRRNVMNAELQAEYAEWDAEKLKANPL
RVKIAGRMMTKRVMGKASFATVRDMSGNIQLYVARDELPEGVYPQFKSWDLGDIIGAEGT
LFRTQKGELSVHVDSIQLLTKSLRPLPEKFHGLSDQETRYRQRYVDLIMNEASRDVFRVR
TKIVDGVRRYLMAKDYLEVETPMMQAIPGGATARPFTTHHNALDMGLYLRIAPELYLKRL
VVGGFERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYHELMDLTEDMLRTVTQDVLG
STQVHYQGLDIDFAKPFTRMTVKESILHFNPDLTAEQLDDIESARAIAKSLDIPLKQSYG
LGKVQIEIFEKTVEHRLMDPTFITAYPTEVSPLARRNDDDPFVTDRFEFFVGGREIANGF
SELNDAEDQAERFKAQVEEKDAGDDEAMHYDADYIRALEYGMPPTAGEGIGIDRLVMLLT
DSPSIRDVLLFPHMRPE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgaaacagaactggatgaaaaccgtttaattgctcagagacgtgaaaaactg
gcggagttgagagaacaaggtaacgcctttccaaacgactttcgtcgtaatgtcatgaat
gctgaactgcaggcagagtatgccgagtgggatgctgaaaaattaaaagcgaacccattg
cgtgtgaagattgctggccgcatgatgaccaaacgtgtcatgggtaaggccagttttgcg
acggtacgcgacatgtcaggtaatattcaattgtatgtggctcgtgatgaattacctgaa
ggcgtttatcctcaatttaaaagctgggacctgggcgatatcatcggtgcagaaggcaca
ttatttcgcactcaaaaaggtgagttgtcagtgcatgttgatagcattcagttattaacc
aaatcactcaggccactgcctgagaaattccacggattatctgatcaggaaacacgttac
cgccaacgttatgttgatttaatcatgaacgaagccagtcgtgacgtattccgtgtgcgg
actaaaatcgttgatggtgttcgtcgttatttgatggcgaaagattatcttgaagtggaa
acacccatgatgcaagccattcctggtggggcaaccgctcgtccattcaccacacatcat
aatgcattagacatgggcttatatcttcgcatagcccctgagctgtatttaaaacgtttg
gtcgtgggtggttttgagcgtgtgtttgaaatcaatcgcaatttccgtaatgaaggttta
tctacgcgtcataatccagagttcaccatggtggagttttatcaggcctatgctgattac
catgaattaatggatctgacagaggacatgttacgtacggtcactcaagatgttttaggc
tcaacgcaagttcactatcaaggtctggatattgattttgccaaaccgtttactcgtatg
acggtaaaagagtcgattctgcactttaatccagatctaacagcggaacagttggatgat
attgagtcggcgcgtgcgattgctaaatcgttagatatcccactaaaacaatcatatggg
ctgggtaaagtccaaatcgagatctttgaaaaaaccgttgagcaccgtttgatggatccg
acatttatcactgcctatccaacagaggtctctccactggctcgccgtaatgatgatgac
ccgttcgtcactgatcgatttgaattttttgtgggtggccgtgaaattgctaatggcttc
tcagagttgaacgatgcagaagatcaggccgaacgtttcaaagcgcaggtagaagaaaaa
gatgccggtgacgatgaggcgatgcactacgatgccgattatatccgtgcacttgaatac
ggtatgccccctacagcgggagaaggtatcggtattgatcgattggtcatgttattgacc
gactcaccttccatccgtgacgtattgttattcccgcatatgcgtccggaatag
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