Methylophaga marina: GCM100_22550
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Entry
GCM100_22550 CDS
T09183
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00541
Biosynthesis of various nucleotide sugars
mmaf01100
Metabolic pathways
mmaf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GCM100_22550 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mmaf01005
]
GCM100_22550 (kdsB)
Enzymes [BR:
mmaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GCM100_22550 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
mmaf01005
]
Lipid A
GCM100_22550 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
IspD
DUF2064
SAM_1
Motif
Other DBs
NCBI-ProteinID:
BDZ74536
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Position
complement(2195563..2196315)
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AA seq
250 aa
AA seq
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MSFNIIIPARYASSRLPGKPLMDIAGKPMIQHVYERALESDADKVIIATDDERIADTVTA
FDADVCLTAETHRSGTDRLAEVVEKRQFNDEEIVINVQGDEPCLPALLINQVAADLAQHK
EADMASLFSRIHQDKQVFDPNVVKVVMDNQGYALYFSRAPIPWMRDHFHKTELPPKLPHY
RHIGLYGYRAHFLKNYAGMTPCLLETEESLEQLRVLFHGKKIHMSEALISAGHGVDTEAD
LIEVRQLLAE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaatatcattattccagctcgttatgcatcaagtcgcctgccaggtaaaccg
ctaatggatattgctggtaaacccatgattcaacatgtctatgaacgtgctctggagagt
gatgctgacaaggtcattatcgcaacagatgatgaacgtattgctgacacagtgaccgct
tttgatgccgatgtatgtttgacggcggagactcatcgctccggaacagacagactggcc
gaagttgttgaaaaacgccagttcaatgatgaggaaatagtgattaatgtacaaggtgat
gagccttgtttacctgccttactgattaatcaggttgctgcagacctggctcaacacaaa
gaagcagatatggcttcgctatttagtcgaattcatcaagataaacaagtattcgatcct
aatgtggtcaaagtggtaatggataatcaaggctatgctttatatttcagccgtgctcct
attccgtggatgcgagatcactttcacaaaacggaattaccaccaaaacttcctcattat
cgccatattggcttatatggttaccgcgctcacttcttgaaaaactacgcagggatgacg
ccgtgtttgcttgaaacggaagaatcattggaacagttacgtgtattattccacgggaag
aaaatccacatgtcagaagctcttattagtgccggacatggggtagatacagaagcagac
ttaattgaagtcaggcagttattggcagagtaa
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