Methylophaga marina: GCM100_23320
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Entry
GCM100_23320 CDS
T09183
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00220
Arginine biosynthesis
mmaf00240
Pyrimidine metabolism
mmaf00250
Alanine, aspartate and glutamate metabolism
mmaf01100
Metabolic pathways
mmaf01110
Biosynthesis of secondary metabolites
mmaf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GCM100_23320 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GCM100_23320 (carB)
00220 Arginine biosynthesis
GCM100_23320 (carB)
Enzymes [BR:
mmaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GCM100_23320 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDZ74613
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All DBs
Position
2264625..2267843
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AA seq
1072 aa
AA seq
DB search
MAKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPNM
ADATYIEPVTWQAVSKVIEAERPDAILPTMGGQTALNCALDLEKHGILEQFGVEMIGADS
EAINKAEDRDLFREAMRKIGLDMPQSDIAHTLDEAIKVQEKFGFPVIIRPSFTMGGSGGG
IAYNKQDFIEICQRGLYLSPTSELLIEESIIGWKEYEMEVVRDRKDNAIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPETGRLIIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNEITGNATPASFEPTIDYVVTKVP
RFTFEKFPQADNRLSTQMKSVGEVMAIGRNFQESLQKALRGLEIDRDGLTEIIELTEENT
AETLRRELSLPGSDRLWFVADAFRYGFSFDEIQKLTHIDPWFLIQIEELVTLENQLKERS
LNDIDQQEMYALKRKGFSDSRLAKLLLKTEKQVREYRQAMQVRPVYKRVDTCGAEFATGT
AYMYSTYDMECEANPSDRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFESLTLEDVLEIVELEKPKGVIVQFGGQTPLKLARALEAAGVPI
IGTSPDAIDHAEDRERFQQMVEKLNLLQPPNRLAHSVDTAVSLASEIGYPLVVRPSYVLG
GRAMEIVYNEDELQRYMLNAVKVSNESPVLLDRFLDDAIEVDVDAICDGKDVLIGGIMEH
IEQAGVHSGDSACALPPYSLSQATQDQLREQVRQMALELGVKGLMNTQFAIKGEQIYILE
VNPRASRTVPYVSKSIGEPLAKIAARAMAGRSLVDQGVTKEVIPSYYSVKEAVFPFIKFQ
GVDPILGPEMKSTGEVMGVGRTFGEAFAKSQLAASVVLPTGGKAFISVREADKVAVIQIA
KDLSSLGFALLATRGTQRVLEEAGVSCEPVNKVAEGQPHIVDMIKNDEIDLIVNTTEGRQ
SVADSREIRRAALQHQVNYTTTLAAARATVQALNSEDVGSVNRLQSLHGELN
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgtactgatattcaaagtattctgattctgggtgcaggaccgattgttatc
ggtcaagcctgtgagttcgattattctggtgcacaagcgtgtaaagcgctgagagaagaa
ggttaccgtgtgattctggtgaactcgaatccagccacgataatgaccgatcccaatatg
gccgacgcaacctatattgagcctgttacctggcaagcagtaagtaaagtcattgaagcg
gaacgccccgatgctatcttgcctactatgggtggtcagacggcattgaactgtgcatta
gatctggaaaaacacggcatcttagaacaatttggtgtcgaaatgatcggcgctgacagt
gaagcgattaacaaagctgaagaccgtgacttattccgtgaagcaatgcgtaaaatcggt
ctggatatgccgcagtctgatattgctcacacattagatgaagcaataaaagttcaagaa
aaatttggctttccagtgattattcgtccatcttttacaatgggtggcagtggcggtggt
atcgcatacaataaacaagatttcattgaaatctgtcagcgcggtttatacctcagccct
acatctgagctactgattgaagaatccatcattggttggaaagagtatgaaatggaagtg
gtgcgcgatcgtaaagataacgccatcattatctgctccattgaaaacctggatccaatg
ggcgtgcataccggtgactcaatcacggttgcgccagcacaaactctgacagataaagaa
tatcaaatcatgcgtaatgcctctctggcagtactgcgtgagatcggtgtcgataccggt
ggttcaaatgtgcagtttgccgttaatcccgagacaggacgtctcattattatcgagatg
aaccctcgtgtatcacgttcttctgcgttggcctctaaagcaacaggtttccctatcgca
aaagttgctgcaaaactggcagtgggttacacgctggatgaattgcaaaacgaaattaca
ggtaatgcaacaccggcctcgtttgagccaacaattgactatgtggtaacaaaagtaccg
cgttttacctttgaaaaattcccacaagccgacaaccgtctgagcacacagatgaagtct
gttggtgaggtgatggcgattggccgtaactttcaggaatcattacaaaaagccctgcgt
ggactagaaattgatcgtgatggtttgacagaaatcattgaactgacagaagaaaacaca
gcggaaacattacgccgtgagttgagtctgccaggttctgaccgtttatggtttgtggca
gatgctttccgttatggctttagttttgacgaaattcaaaagctaacgcatatcgatcca
tggttcttgatccagatcgaagaattggtgacattagaaaaccaactcaaagagcgttcg
ctgaatgatatcgatcagcaagagatgtatgccttaaaacgcaaaggtttctctgattca
cgtctggctaaactgttactgaagactgaaaaacaagtccgtgaataccgtcaggcgatg
caggtccgtcctgtctacaaacgtgttgatacctgtggtgctgagtttgccactggcaca
gcgtatatgtattcaacctatgatatggaatgtgaagccaacccaagtgaccgtgacaag
atcatgattttgggtggtgggcctaaccgtatcggtcaagggattgagtttgactattgc
tgtgttcatgctgcattagccttacgtgaagatggttatgaaaccattatggtcaactgt
aacccagaaactgtttccactgattacgacacatctgaccgtttatattttgaatcattg
actttagaagacgtattagaaattgtcgagttagaaaagccaaaaggcgtcatcgttcag
ttcggtggtcaaacacctctaaaattagcgcgtgcacttgaagcggcaggtgtgcctatt
attggtacttcgccagatgctattgatcatgctgaagaccgcgagcgtttccagcaaatg
gttgaaaaactgaacttgctgcaaccacctaatagattggcacactctgttgatactgca
gtgtcactcgcttctgaaattggttatccattagttgttcgtccgtcttatgttcttggt
ggacgcgcgatggaaattgtttacaacgaagatgagttacagcgttacatgttaaatgct
gtcaaagtatcgaacgaatcaccagtcttactggatcgtttcctcgatgatgcgatagaa
gttgacgttgatgctatctgtgatggtaaagatgtgctgattggtggcattatggaacat
attgagcaggctggtgttcactctggtgactctgcttgtgcattacctccatacagttta
agtcaggcaacacaagatcaacttcgtgaacaagtacgccaaatggctttagagcttggt
gtaaaaggcttaatgaacacgcagtttgctatcaagggtgagcaaatatacattcttgag
gtcaacccacgtgcgtccagaacggttccttatgtatcgaaatcaattggtgaaccgctc
gctaaaattgctgctagggcaatggctggccgatcactagttgatcaaggtgtcactaaa
gaagtgattccatcttactattcagttaaagaagcggtattcccatttatcaaattccaa
ggtgttgatccgatccttgggcctgagatgaaatcaacaggcgaagtcatgggggttggc
agaacgtttggtgaagcctttgcaaaatcacagttagctgcctctgtcgtgttaccgaca
ggtggtaaagcctttatcagcgttcgtgaggctgataaggtagcagttattcaaattgca
aaagacctgtcgtcacttggttttgctttactagccaccagaggtacacaacgtgtgctg
gaagaagctggtgtgtcatgtgaacccgtaaacaaggtcgcagaaggtcaaccgcatatc
gttgatatgattaaaaatgatgaaatcgacttgattgtgaataccacagaaggtcgtcag
tctgtcgcggattcaagagaaatccgtcgcgcggccttacagcatcaagtcaattataca
accacattggcagcggcaagggccactgttcaagcattaaatagtgaagatgttggttct
gttaacagactgcaatctttgcatggagagttaaattaa
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