KEGG   Methylophaga marina: GCM100_25290
Entry
GCM100_25290      CDS       T09183                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
mmaf  Methylophaga marina
Brite
KEGG Orthology (KO) [BR:mmaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmaf03400]
    GCM100_25290 (rep)
Enzymes [BR:mmaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GCM100_25290 (rep)
DNA repair and recombination proteins [BR:mmaf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GCM100_25290 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12
Other DBs
NCBI-ProteinID: BDZ74810
LinkDB
Position
2471636..2473657
AA seq 673 aa
MLNDLNPQQQEAARHIDGPLLVLAGAGSGKTRVITRKIAYLIEQCGIPAKNIAAVTFTNK
AAREMKTRVSELMASRQNSAAARGLMVSTFHTLGLNILRREYKSLGYRSGFSIFDAQDSL
AVLRDLMGRDFAADSEHAEQVQWQISEWKNQLILPDKAMQIAEAGTQMAAAKVYPLYTAA
LQAYNAVDFDDLILKPVVLFRENPEVLKKWQARIHYLLVDEYQDTNGCQYELVKQLVGIR
EALTVVGDDDQSVYSWRGARPENLAQLQTDYPRLKLIKLEQNYRSMSRILRVANTLIRNN
PHVFEKQLWSALGEGDPIRVIGCRDDDHESEKVVSELLYHKLKHQASFKDYAILYRSNHQ
SRPIERVLREHNVPYFLTGGTSFFSRIEVKDIMAYLRLLANQDDDNAFLRVINTPRRGIG
SSTLQALGNYATERKTSLFGACFEMGLAEKLPEKAILNLTHFANWLVDIADRAKRGDLMS
AIRDMVEEIEYRGWLEETSGDPNKAERRMDNVLELLSWIERIIENDTEEKSIGDIAARLT
LMDILDRQEDENQADAVHLMTLHAAKGLEFPHVFMIGMEEEILPHRTSIEEGTIEEERRL
TYVGITRAQRSLVMTMANTRKRYGEKMECEESRFLRELPSDDLIWMSEKTQADPEERKER
GKAHLSNIRQMLK
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgctcaatgatcttaacccgcagcagcaggaagctgcgcgtcatatagatggacccctc
ctagttttagctggtgccggtagtggtaagacgcgggtaataacccgaaagattgcctat
ctgattgagcaatgtggtattccagccaaaaatattgctgcagtcactttcaccaataaa
gcggcgcgtgagatgaaaacccgtgtgtctgaattgatggccagtcgtcaaaattcggcg
gcagcacgtggtttgatggtctcaactttccacacacttggtttgaatattctacgccgt
gaatataaatcactcggatatcgcagtggtttttctatttttgatgctcaagacagtctg
gcggtattacgtgatctgatgggacgtgattttgctgcagatagtgagcatgctgaacag
gtgcagtggcaaatatcagagtggaagaatcagctgattctgcctgacaaggccatgcaa
attgctgaagcaggtacgcaaatggctgcagcgaaagtgtatccactctataccgctgcg
ttacaagcctataacgccgttgattttgatgatttgatactcaaaccggtggtgttgttt
cgtgaaaaccctgaagtattaaaaaagtggcaagcgcgtattcactatttgttagtggat
gagtatcaggataccaatggctgccagtatgagctggtcaagcagctggtcggcattcgt
gaagcactgacagtggtaggtgatgatgatcagtctgtctattcatggcgtggtgcccga
ccggaaaatctggcacaactacagaccgactatcctcgtctgaaactgattaaactcgaa
caaaattaccgttccatgagccgcattctacgagtggctaatactctgatacgcaataat
cctcacgtatttgaaaagcaattatggagtgcactgggagagggtgatccgatacgggtg
atcggctgtcgagatgatgatcatgaatcagaaaaagtggtgtctgagctgctttatcac
aagctgaaacatcaggccagtttcaaagattatgcgatcctctatcgcagtaatcatcag
tccagaccgattgaacgcgtattacgtgaacataatgtgccttacttcttaactggcggc
acatcgtttttctcacggatcgaagtgaaagacatcatggcctatctgagattgctagcg
aatcaggatgatgacaatgccttccttcgggttattaatacgccgcgccgtgggataggt
tcaagcactctacaagctctcggtaattatgctactgagcgtaaaaccagtttgtttggt
gcctgctttgagatgggcctggctgaaaaattgcctgaaaaagcgattctgaatctgacc
cattttgctaactggttggttgatattgcagatagagctaaacgtggtgacttaatgagt
gcgatccgcgatatggtcgaagaaatcgaatatcgtggttggctggaagagaccagtggt
gatccgaataaagcagagcggcgcatggacaacgtgctcgagctgttgagctggattgaa
cgtatcatcgaaaatgataccgaagagaaaagtattggcgatattgcagccagactgaca
ttgatggacattctggatcgtcaggaagacgaaaaccaagctgatgccgtgcatttgatg
accttacatgctgcaaaaggtctggagtttccacatgtattcatgattggcatggaagaa
gaaattctgcctcaccgaactagtatcgaagaaggcaccatcgaagaagaacgtcgcctg
acctatgtcggtattacccgagcccaacgcagtctggtcatgacgatggccaatacgcgt
aagcgttatggggagaagatggagtgtgaggaaagccgttttcttcgtgagttaccatca
gatgatctgatttggatgtctgaaaaaacacaggctgatccggaagaacgcaaagagcgt
ggtaaggcgcatctctctaatattcggcaaatgctgaaataa

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