Methylophaga marina: GCM100_25860
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Entry
GCM100_25860 CDS
T09183
Symbol
nirB-1
Name
(GenBank) nitrite reductase large subunit
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00910
Nitrogen metabolism
mmaf01100
Metabolic pathways
mmaf01120
Microbial metabolism in diverse environments
mmaf01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
GCM100_25860 (nirB-1)
Enzymes [BR:
mmaf01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
GCM100_25860 (nirB-1)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox
Pyr_redox_3
NAD_binding_9
3HCDH_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
BDZ74867
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Position
2525302..2527734
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AA seq
810 aa
AA seq
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MREKLVLIGNGMAGVRTLEELLKLAPDKYDITVFGEEPYGNYNRIMLSPVLAGEKTIDEI
MINDLQWYEDNNIKLLSGKKVTRIDRLNRVVTADDGSTENYDRLLLATGSRPFMLPIPGS
DLKGVISFRDIADVDTMLETAKIHKKAVVIGGGLLGLEAANGLMIQGMDVSVVHISDVLM
NQQLDKPASDLMLEELRGKGLTFLMEHQTEAIIGRDRVEKLRFKDGSEIDADLVVMAVGI
RPNIELASSAGIHCDRGIVVDDTMQTFDPRIYAVGECVQHRSQTFGLVAPLFEQAKVCSN
HLAQMGIARYISSVTSTKLKVTGIDLFSAGDFLGDDDTEDLVFKDAARKVYKKLVIKDNQ
LVGAVLYGDTVDGAWYFQLMRDGTDISDIRENMLFGQHHLGDSGHGPSNSVDGLPDDAEI
CGCNGVCKGDIVQAISKHGLFTLDEVKAHTKASASCGSCTGLVEQLLASTLGSDFNDTPS
KKPMCGCTDLSHAEVKAAIIEKSLKNIPDLMSALEWKTEDGCHSCRPALNYYMLSSWPNE
YQDDPQSRFINERVHANIQKDGTYSVVPRIWGGVTNPRELRAIADISEKYNVPTVKITGG
QRIDLLGIKKEDLPKMWADLSDAGFVSGHAYGKSLRTVKTCVGSEWCRFGTQDSTGLGIK
AEKMTWGSWTPHKFKIAVSGCPRNCAEATIKDFGIVCVDSGYELHVGGNGGIKVRATDFL
TKVATEEEALEYCAAFMQLYREEAHYLERTAPWIERVGLKHVTSAVVDDEVNRKRLAERF
HESQKNAQVDPWAEHAAKYKDNYIPIKQVV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaagttagtcctaattggtaatggtatggctggggtgcgaacactggaagag
ttgctcaaactcgcacctgataaatatgacattactgttttcggtgaagaaccttacggt
aattacaaccgcattatgctttcacctgtattggcaggtgaaaaaacgattgatgagatc
atgattaatgatctgcagtggtatgaagataacaacatcaagctgttatctggtaaaaaa
gtgaccagaattgatcgtttaaatcgagtcgtgacagctgatgatggtagcactgaaaac
tatgatcgtcttttgttagccacaggttcacgcccatttatgttgcctattccgggctct
gatttaaagggggtgatcagtttccgtgatattgccgatgtcgatacgatgttggaaacg
gctaaaatccataaaaaagccgtggttatcggtggcggcttattgggtctggaagcagcc
aatgggctaatgattcaaggtatggatgtcagcgttgttcatattagtgatgtgttaatg
aatcagcagctggataaacccgcttctgatttaatgctggaagaacttaggggcaaaggg
ctgacgtttttgatggaacatcagactgaagccatcattggtcgtgaccgtgtcgaaaaa
cttcgctttaaagatggctctgaaattgacgcagacctggttgtgatggccgtgggtatc
cgaccaaacatcgaactagccagctcagccggtattcattgtgaccgtggtatcgtggta
gatgacaccatgcagacctttgatccacgaatttatgccgtaggtgagtgtgttcaacat
cgaagccaaacctttggtctggtggcacctttatttgagcaagccaaagtgtgttcaaac
catttggcccaaatggggattgcacggtatatcagttcagtgacctcaactaaattaaaa
gtgacgggcatcgatctgttttctgcgggtgactttcttggtgatgatgatactgaagat
ttggtatttaaagatgcagccagaaaggtttataaaaagctggtaataaaagataaccaa
ttggttggtgccgtactttatggcgatacagtagatggggcctggtacttccaattgatg
cgtgatggcacagatatttcagatattcgtgaaaatatgttgtttggacaacatcatctg
ggtgattctgggcatggcccgtctaactcggttgatggtttgcctgatgatgctgaaatt
tgtggctgtaatggcgtctgtaaaggtgacattgtgcaggcgatttcaaaacatggcttg
tttactttggatgaagttaaagcccataccaaagcatcagcgtcttgtggatcatgtaca
ggtttagttgaacagttactggcatctactctgggcagtgactttaatgacacacccagc
aagaagccaatgtgtggctgcacggatttgtcgcatgctgaagtcaaagccgcgattatt
gaaaaatcactgaaaaacattccagatttgatgtctgcacttgagtggaaaacagaagat
ggctgccactcctgtcgtcctgccttgaattactacatgttaagtagctggccaaatgag
tatcaggatgatcctcagtcacgtttcattaatgaacgtgtgcatgccaatattcagaaa
gacggcacctattcggtagtacccagaatttggggtggggtaaccaatccaagagagttg
cgtgccattgcagatatttccgaaaaatacaatgtacccacagtcaaaataaccggtggt
caacgaatcgatcttctcggtataaagaaagaagacttacccaaaatgtgggcagatctg
agtgatgctggttttgtttctggtcatgcctacggtaagtccctgcggacagtcaaaacc
tgtgttggatcagaatggtgtcgtttcggcacgcaagattctaccggcctgggtattaaa
gctgaaaaaatgacatggggaagctggacacctcataaattcaagattgccgtatctggc
tgtccacgtaactgtgcagaagcaactatcaaagacttcggtattgtctgtgttgattct
ggctacgaacttcatgttggtggtaacggtgggattaaagtccgggcaacagactttctc
accaaagttgccaccgaagaagaagccttggaatattgcgcggcctttatgcagttatat
cgtgaagaagctcactatttagaacgtaccgcaccttggattgagcgtgttggtttgaaa
catgtgacttcagctgtggtggatgatgaagtgaatcgtaagcggttggctgagcgtttc
catgaatcacaaaagaatgcacaggtcgatccttgggctgagcacgctgccaaatacaaa
gataactatatcccgattaaacaagtagtgtag
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