Methylophaga marina: GCM100_26270
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Entry
GCM100_26270 CDS
T09183
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM100_26270 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmaf01007
]
GCM100_26270 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmaf03016
]
GCM100_26270 (hisS)
Enzymes [BR:
mmaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
GCM100_26270 (hisS)
Amino acid related enzymes [BR:
mmaf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GCM100_26270 (hisS)
Transfer RNA biogenesis [BR:
mmaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GCM100_26270 (hisS)
Prokaryotic type
GCM100_26270 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
DUF7516
Motif
Other DBs
NCBI-ProteinID:
BDZ74908
LinkDB
All DBs
Position
2578629..2579855
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AA seq
408 aa
AA seq
DB search
MNDLLPETTPYWQVIETTLKNVLAGYGYQEIRFPIVEKTELFKRSIGEVTDIVEKEMYTF
EDRNGDSLTLRPEGTAGCVRAAMENGLLNQTQRLWYMGPMFRHERPQKGRYRQFHQLGVE
AYGFDGPDIDAEMIMLTARLWKALGLKGVTLQINSLGSTQARIAYREVLIAYFEKHQAEL
DEDSQRRLHSNPLRILDSKNPAMQALNEAAPKLIDHLDDESKLHFEQLCQILDSVGIDYE
INPRLVRGLDYYGKTVFEWVTDQLGSQGTVCAGGRYDGLVAQLGGKGATAIGFAIGLERL
VALLEATQSLPDIKQTDAYLVAVGEQAMAQAPLLTERLRDELPGIKLISHCGGGSFKSQF
KRADRSGARWTLILGDDEVSSQTIGIKTMETGEQQTIKWADLPSFLSQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccttcttcctgaaacaacaccatactggcaggtcatagaaacgaccttgaaa
aatgtccttgctggttatggttatcaagaaattcgttttccgattgtcgaaaaaacagag
ctttttaaacgctccattggtgaagtcacagacattgtagaaaaagaaatgtataccttt
gaggaccgcaatggagacagtttaacgttgcgtccagaagggacagcaggttgtgttcgt
gctgccatggaaaacggtttactgaatcaaacgcaacgcctttggtacatggggccaatg
tttcgtcatgaacgtccgcaaaaaggccgttatcgccagtttcatcagttgggtgtagaa
gcatatggcttcgatggcccagatatcgatgctgaaatgattatgctgacagcgcgtctt
tggaaagcgttaggtctgaaaggtgtgactctccagataaactcacttggaagtactcaa
gccagaatagcttatcgcgaagttttaattgcctatttcgaaaagcaccaagctgaactc
gatgaagatagccaaagacgtctacactcaaatccactacggattctggatagtaaaaat
cctgcaatgcaggcattaaatgaagcggcccccaaactgatagatcatttggatgatgaa
tctaagctgcattttgaacagttatgtcagatcctcgatagtgttggtattgactacgaa
attaatccaaggctggtcagaggtttggattattacggaaaaaccgtttttgaatgggta
accgaccagttgggttcacaaggtactgtctgtgctggtggccgttatgatggtttagtg
gctcaattgggtggaaaaggcgccacagcgattggttttgctattggtctggagcgactt
gtcgcactgctcgaagcaacccaatcattaccggatattaaacaaactgatgcctactta
gttgctgtcggtgaacaggcaatggcacaagcaccattattaacggaacgtttgcgtgat
gaacttcctggcataaagttgattagccactgtggtggtggtagttttaaaagccaattt
aaacgcgcagaccgaagcggagcgcgttggacacttattctgggagatgatgaagtgtcc
agccaaacaatcggtataaaaaccatggagacaggggagcagcagaccataaagtgggct
gatctgccttcattcctcagtcaataa
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