Methylophaga marina: GCM100_28410
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Entry
GCM100_28410 CDS
T09183
Name
(GenBank) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmaf03032
]
GCM100_28410
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_28410
Enzymes [BR:
mmaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GCM100_28410
DNA replication proteins [BR:
mmaf03032
]
Prokaryotic type
DNA Topoisomerases
GCM100_28410
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM100_28410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
Ins134_P3_kin_N
Motif
Other DBs
NCBI-ProteinID:
BDZ75122
LinkDB
All DBs
Position
2799885..2801759
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AA seq
624 aa
AA seq
DB search
MSEIALELDSIGIETEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNSWN
SPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSMRYMLVDGQGNFGSVDGDPPAAM
RYTEVRMAKIAHEMLADLEKETVDFVPNYDESESEPAVLPTKIPALLVNGSSGIAVGMAT
NIPPHNLTEILNACIAIIDNPDVTTHELMEYVPGPDFPTSGIINGARGIAEAYQTGRGRV
HIRARADIETNEASGQQSIVVKELPYQVNKARLLEKIAELVKDKKIEGISALRDESDKDG
MRMVIVLKRGEVPEVILNNLYQQTQMQTVFGINMVAIVDGQPRTLNLKEILDAFIRHRRE
VVTRRSIYDLRKARERAHVLEGLATALANIDEVIELIKASPNPAEAKEALLAKGWASGMI
LEMLGAAGAEASRPEDLAEQYGLVNNLYHLSPVQAQAILDMRLHRLTGLEQDKILQEYRE
VLEVIAELLAILSDPDNLMAVIREELVAINAEYGDERRTEILANHLDLTLEDLITEEEMV
VTLSHAGYAKTQQLDTYQAQKRGGKGKAATAMKDEDFIEHLFIANTHDTLLCFSSAGKVY
WKKSMNCHKEAALHGVNPSLTYYR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattgccttagaactggattcgataggtatcgaaaccgagatgaagcagtcg
taccttgactacgcgatgagcgttatcgtgggacgtgcgctaccggatgttcgtgatgga
ttaaaacctgttcatcgtcgtgttctctacgcgatgagagagctaggtaatagctggaac
agcccatataaaaagtctgcccgtattgtcggtgatgttatcggtaaatatcaccctcat
ggtgatacggctgtttatgacaccatggtacgtatggctcagccattttccatgcgatac
atgctggtcgatgggcaaggtaactttggttcagtggatggtgaccctccggcagcgatg
cgttacaccgaagtacgcatggcaaaaattgctcatgaaatgctggccgatcttgaaaaa
gaaactgttgactttgttcccaactatgatgagtcagagtcagagcctgcggtactacca
acaaaaattccagcacttctggtcaacggttcttctggtattgcggtgggtatggcaacc
aatattccgcctcacaacctcacagaaattctgaatgcctgtattgctattatcgacaat
ccagatgtcacaacacatgagttaatggaatatgtaccggggcctgatttcccgacttcg
ggcatcattaatggggctcgtggtattgctgaagcctatcaaactggtcgtggccgagta
cacattcgtgcgcgtgctgacattgagaccaatgaggcttcaggtcaacaaagtattgtt
gttaaagaactgccttaccaggtcaacaaagcccgattattagaaaaaatcgccgagctt
gttaaagataaaaaaattgaagggatctcggcattgcgcgatgagtctgacaaagacggt
atgcgcatggtgattgtccttaagcgtggtgaagtccctgaggtcatccttaacaatctg
tatcagcagacacagatgcaaactgtattcggcatcaacatggttgcgattgttgatgga
cagcctcgtacgcttaacctgaaagaaattctggatgccttcattcgccaccgtcgtgaa
gtcgtgacacgtcgctcgatttatgatctcagaaaagcgcgtgagcgtgcacacgtatta
gaaggtctggcaaccgcattagccaatattgatgaagttatcgagcttattaaagcttct
cccaaccctgctgaagcaaaagaagctctgttagcaaaaggctgggcttcaggcatgatt
ctggagatgttaggtgctgctggcgcagaagcttctcgtccagaggatctggctgaacaa
tatggcttagtgaacaatctctatcacctatcgccagtccaggcacaagctattttggat
atgcgcttacaccgcctaacaggtctggaacaagataagattctgcaagagtaccgagaa
gttctggaggtcattgcagagttgttagctattttgagtgatccggataatttgatggcg
gtgattcgtgaagagttagttgctattaatgccgaatacggtgatgagcgtcgtacagaa
attctggccaatcatcttgatctaacgcttgaagatttaattaccgaagaagaaatggta
gtgacgctatcacatgctggttatgccaaaacccagcagcttgatacgtatcaggcacaa
aagcgtggtggtaaaggtaaagcggcgactgccatgaaagatgaagatttcattgagcat
ttgtttattgccaatacacatgacacgcttttatgtttctccagcgccggtaaagtgtat
tggaaaaagtctatgaactgccacaaggaagccgcgcttcacggggtaaacccatcatta
acttattaccgttag
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