Methylophaga marina: GCM100_28590
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Entry
GCM100_28590 CDS
T09183
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00010
Glycolysis / Gluconeogenesis
mmaf00020
Citrate cycle (TCA cycle)
mmaf00260
Glycine, serine and threonine metabolism
mmaf00280
Valine, leucine and isoleucine degradation
mmaf00310
Lysine degradation
mmaf00380
Tryptophan metabolism
mmaf00620
Pyruvate metabolism
mmaf00630
Glyoxylate and dicarboxylate metabolism
mmaf00640
Propanoate metabolism
mmaf00670
One carbon pool by folate
mmaf00785
Lipoic acid metabolism
mmaf01100
Metabolic pathways
mmaf01110
Biosynthesis of secondary metabolites
mmaf01120
Microbial metabolism in diverse environments
mmaf01200
Carbon metabolism
mmaf01210
2-Oxocarboxylic acid metabolism
mmaf01240
Biosynthesis of cofactors
Module
mmaf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
GCM100_28590 (lpdA)
00020 Citrate cycle (TCA cycle)
GCM100_28590 (lpdA)
00620 Pyruvate metabolism
GCM100_28590 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
GCM100_28590 (lpdA)
00640 Propanoate metabolism
GCM100_28590 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GCM100_28590 (lpdA)
00280 Valine, leucine and isoleucine degradation
GCM100_28590 (lpdA)
00310 Lysine degradation
GCM100_28590 (lpdA)
00380 Tryptophan metabolism
GCM100_28590 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GCM100_28590 (lpdA)
00670 One carbon pool by folate
GCM100_28590 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmaf04147
]
GCM100_28590 (lpdA)
Enzymes [BR:
mmaf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
GCM100_28590 (lpdA)
Exosome [BR:
mmaf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
GCM100_28590 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
NAD_binding_8
GIDA
AlaDh_PNT_C
HI0933_like
Biotin_lipoyl_2
FAD_binding_2
DAO
FAD_binding_3
Thi4
GCV_H
3HCDH_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
BDZ75140
LinkDB
All DBs
Position
2817031..2818803
Genome browser
AA seq
590 aa
AA seq
DB search
MSEIEVKVPDIGDFDAVEIIEVLVSEGDIVEENQDIITLESDKAAMEIPSTAKGKIVSLK
VSLGDKVAEGDVILTLEAEQAEADTEDTESIPEATETKASSPEKAAPTPAAVPHGDADLH
AEVLVLGSGPGGYTAAFRAADLGKQVVMVERHERIGGVCLNVGCIPSKALLHTAQIINEA
EEMSHHGVKFNKPQIDIRELESWKSSVVNQLTGGLKALAKTRKVTIVQGEGSFTSPNTLK
VEGPDGEKTISFDHCIIAAGSRVTKIPVFPNDDPRMMDSTDALELEDVPVKLLVIGGGII
GLEMATVYDALGSKITVVELQDSLIPGADKDIVKPLLKRVEQKYDNIYLNTKVSNIEPKE
DGLLVTFEGKDAPEQAMFDKILVAVGRSPNGKLINAEAAGVIVTDHGFIETDGQMRTNVP
HIFAIGDIVGQPMLAHKATHEGKVAAEVIAGQKSVFEPMTIPSVAYTDPEVAWMGMSEDE
AKKQGIDYVKGAFPWAASGRSLSLGRDEGLTKAIFEKETGRLIGAGIVGPNAGELIAEAV
LALEMGADAEDIGLTIHPHPTLSETLGFAAEMAEGSITDLMPPRKTLHSK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatagaagtaaaagtccctgatattggtgattttgatgctgttgaaatcatc
gaagtacttgtgagtgaaggcgatattgttgaagagaatcaggatattatcactcttgaa
tcagataaagcggcaatggaaattcctagcacagccaaaggaaaaattgtcagcttaaag
gtatctctaggcgataaggtggctgaaggtgatgttatcttaacgttagaagctgagcag
gccgaggctgatactgaagacaccgagtcaatacctgaagcaacggaaactaaagcaagc
tcgccagaaaaagcagcgccaacaccagcggctgtaccgcatggtgatgcggatctgcat
gccgaggtattggtgctcggttctggaccgggtggctatactgcagcattcagagcggct
gatctgggtaagcaagtcgtcatggttgaacgtcacgaacgaattggtggtgtttgctta
aatgtcggctgtattccttctaaagcattgttacacacagcgcagattattaatgaagcc
gaagaaatgtcacatcatggggtgaaattcaataaacctcagatcgatattcgcgaatta
gaatcttggaaaagcagtgttgttaatcagttaactggcggcttaaaagcattagctaaa
acacgtaaggtcaccatagtgcaaggcgagggtagctttaccagcccaaacactttgaag
gttgaagggcctgacggtgagaaaacgatctcgtttgaccactgtattattgctgccggt
tcacgcgtaacaaaaatccctgtattcccaaatgacgatccaagaatgatggattccacg
gatgcattagaactggaagatgtaccagtgaaattattggtcattggcggtggtatcatc
ggacttgaaatggcgactgtttatgatgctttaggctccaagatcactgtcgttgagtta
caagatagtctgattccgggggcggataaagatattgttaaaccattgctcaagcgtgta
gagcaaaaatacgacaatatatatctgaacactaaagtcagtaacattgagccaaaagaa
gatggtttactcgtcacttttgagggtaaagatgcacctgaacaagcgatgtttgacaaa
atactggttgctgttggtcgttcaccaaacggtaaactgattaatgctgaagcagcaggt
gtcatcgtgactgatcatggctttatcgaaacggatggccagatgcgtacgaatgtgccg
catatctttgctattggtgacattgtaggtcaaccgatgcttgcccataaagcaacgcat
gaagggaaagtggctgctgaggtgattgctggtcagaaatccgtatttgaacctatgacg
ataccatctgttgcctataccgatcctgaagtggcctggatgggaatgagcgaagacgaa
gccaaaaagcaaggcattgattatgtgaaaggtgccttcccctgggctgccagtggtaga
agcttaagcctgggtagagatgaaggtctgacaaaagctatctttgaaaaagaaactggc
cgattaattggtgcaggtattgttggtcctaatgcgggtgaattaattgcagaagctgtt
ctcgctctcgagatgggagcagatgctgaggatattggtttgactatccatcctcatcca
actttatctgagacattaggatttgctgcagaaatggccgaaggatcaatcaccgatctg
atgccgccacgcaagactttgcactctaagtaa
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