KEGG   Methylophaga marina: GCM100_30080
Entry
GCM100_30080      CDS       T09183                                 
Symbol
yoaA
Name
(GenBank) ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
mmaf  Methylophaga marina
Brite
KEGG Orthology (KO) [BR:mmaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmaf03400]
    GCM100_30080 (yoaA)
Enzymes [BR:mmaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     GCM100_30080 (yoaA)
DNA repair and recombination proteins [BR:mmaf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GCM100_30080 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C Glyco_tran_10_N Phage_HK97_TLTM RecA-like_ORC2
Other DBs
NCBI-ProteinID: BDZ75289
LinkDB
Position
2954078..2955997
AA seq 639 aa
MIERIDELFADNGLLSKHISGYTSRTQQLEMARQVGEALTHGDILIAEAGTGTGKTFAYL
APAMLSGQKVFISTGTKNLQDQLFNKDLPKLREVLSVPLKTALLKGRSNYLCHHRLELAE
SEPGQQYHQHTLQTLREWSGKTTTGDLSETDLLEENSPLWPKVTSTVDNCLGQQCPQYDE
CFIVEARRKAQEADIVVVNHHLLMSDMALKSSGQGEVLPDADAYIIDEAHQLPAIASQFL
GHRVSSHQIQELSRDSIREMEAEATDMNDIRTAAEQLDNRLHQFNLSLGEHEQRVPWQPV
LEKSQDIIEKLDTLLESLEKLEIQLDAASERGRGLEQCHQRCQDLIERLSIFQQNEQTDL
VLWLDNRSSSFILHATQQEVSQYFQAWIKDKPQAWVFTSATLTVAGKFNNFTHQLGLEDP
VTASWQSPFDYGKQSLLYMPSIPVEPSNPNYNSHVAEVAKSVIEHSQGRIFLLFTSYKAM
HEVAEALKESDYPVLVQGSGAKTQLLEEFRSHGNAILLGTNSFWEGVDVRGEALSCVLID
KIPFASPGDPVLEARINDLKERGGNPFRTIQIPAAVIQLKQGIGRLIRDTHDSGVLVLCD
PRFLSKPYGKVFMRSLPPMPISQNIEDVETFLPDVFDNH
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgatcgaacgcattgatgaactatttgcagacaatggtttattatccaaacacatttca
ggttacaccagtagaacccagcaattggagatggcacggcaggtcggtgaagcgctaacg
catggcgatattctcatcgctgaagccggcacgggtacaggtaagacctttgcctacctt
gcaccagccatgctttcagggcagaaagtgtttatctcaacgggcacaaaaaacttacaa
gatcaattatttaacaaagacttaccgaaacttcgtgaagtactttctgtgccattaaaa
acggccttattgaaaggccgaagtaattatctctgtcatcaccgtctggaactggctgaa
tctgaacccggtcagcaataccatcaacacaccttgcaaaccttgcgtgagtggagcggt
aaaacaaccacaggtgatttaagtgaaacggatttattagaagaaaactcgccgttgtgg
cccaaagtgacgtcaacggttgataattgtcttgggcagcaatgtccccaatacgatgaa
tgctttattgttgaagcgagacgtaaagcacaggaagccgacattgtcgtggtgaatcat
catttattaatgtcagatatggcactaaaatcatctggtcagggtgaggttttgcctgat
gccgatgcgtatatcattgatgaagctcatcaacttcctgccattgccagtcaatttctc
ggccatcgggtcagcagtcatcaaatccaggagttaagccgagacagtatccgtgaaatg
gaagctgaagcaacggatatgaacgatatccgcactgcggcagaacaattagataatcgc
ttacatcaatttaatctatccttgggtgaacatgagcaacgcgttccctggcaacccgtg
ttagaaaagtcacaagatattatagaaaagctcgataccttactggaatcattagagaaa
ttagaaattcaactcgatgcagcttccgagcggggcagaggcttagaacaatgtcaccaa
cgctgtcaggatttgattgaacgtttgtccatatttcagcaaaacgaacaaacagactta
gttttatggctggacaaccgtagttcgagttttattttgcatgccacgcaacaagaagtc
agccagtatttccaagcctggataaaagataaaccacaggcttgggtcttcacttcagcc
acactcacggtagcaggcaagtttaataactttactcaccagttaggtttggaagatcca
gtgacagccagttggcaaagtccatttgattacggcaaacaaagtttactttatatgccc
tcaatcccggtcgagccatccaacccgaattacaatagtcatgtggcagaagtcgcaaaa
tcagtcattgagcacagccaggggcgaatcttcttattattcaccagttataaagcgatg
catgaagtcgctgaagccttaaaagaatctgattatcccgtgctggttcaaggttctggt
gctaaaacgcaactgctcgaagagtttcgcagtcatggcaatgccattttgctaggtacc
aatagtttctgggaaggggtagacgttaggggagaagctttatcctgcgtgttgattgat
aaaattccttttgcttcacctggcgatccggtgctggaagcacgcattaatgatttaaaa
gagcggggcggtaatccctttcgaacgatccaaatccctgctgcagttattcagctgaaa
cagggaattggccgtttgattcgtgatacccatgactctggtgtgttggtattatgtgat
ccacgttttctgagtaaaccctatggcaaagtgtttatgcggagtttaccgccaatgcca
atcagtcagaatattgaagatgtggaaacttttttgccagacgtgtttgataaccactaa

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