Methylophaga marina: GCM100_30410
Help
Entry
GCM100_30410 CDS
T09183
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
mmaf
Methylophaga marina
Pathway
mmaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM100_30410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmaf02000
]
GCM100_30410
Transporters [BR:
mmaf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GCM100_30410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
BDZ75322
LinkDB
All DBs
Position
2985940..2987244
Genome browser
AA seq
434 aa
AA seq
DB search
MNNPEASTQRTQENISGDRRDFIKKSGVLAGLSVLSSKAPFVFARTTPTLRVMGTHVTLQ
EEIRQQAMADLGINIVFEPGGEAELIQKATTQPGSFDIYEQWTDSIRQLWQASVIQPIDT
DRLSYWDEINALSKTGKIVPEANIGLGDAPHKILNIQSDGSLGTEFTGKISFLPYVHNVD
SFGYNTNAIKKGIPYETESWSWLLDEQYRGKVGIVNSPTIGIFDLALAAESKGLINFNDM
SDMTQTEIDGLFSILLDFKKQHHFAGFWNSVPQSIDYMRQGRVHLESMFSPAVSALNGDG
IPVTYAAPREGYRAWHGVMCLSSECQGYVKDAAYDYMNWWLSGWAGAYVARQGYYISNPE
RSKPLLDKNEWDYWYEGKEATADLKGTDGKISVKAGDIRTGGAYTTRLSNIAVWNTVMPN
YDYSLQKWYEFLLA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccagaagcctctacccaacgaacacaagaaaatatctcgggggatagacgc
gattttataaaaaaatctggtgtattagctggcctatccgttttatcaagcaaagcgcct
tttgtgttcgccagaacaacaccaactttacgcgtgatgggcacacacgtgacgctacaa
gaagagataagacaacaagccatggctgatcttggtattaatatcgtttttgaaccaggc
ggcgaggctgaacttattcaaaaagccacaacccaaccaggctcttttgatatctatgaa
caatggaccgacagtatccgacagctctggcaggcatctgtaattcagcccattgatacg
gaccgcttaagctactgggatgaaatcaatgccctctcaaaaacagggaaaattgtacct
gaagctaatataggcttgggtgatgcaccacataaaattttaaatattcaatctgatggc
agtttaggaactgaattcaccggcaagattagttttttaccctatgttcacaatgtggat
tcatttggctacaacacaaatgccataaaaaaaggcattccgtatgaaacggaaagttgg
tcctggttattagatgagcagtatcggggtaaagtgggcattgttaattcaccaaccatc
ggtatttttgatttggctctcgctgcagagagtaaaggtctgattaatttcaatgatatg
agcgatatgacgcaaaccgaaattgatggcctcttttctattttgctggatttcaaaaaa
caacatcactttgcaggtttctggaattcggtacctcaatcaattgattatatgcgtcaa
ggacgggtacacctggaaagcatgttttcaccagcagtttctgcactcaatggcgacggt
atccctgttacgtatgcagcccccagagaaggttaccgtgcctggcatggtgtgatgtgt
ttatccagtgaatgccaggggtatgtcaaagatgccgcttatgattatatgaactggtgg
ctaagtggttgggctggtgcttatgttgcccgtcaaggttattacatttcaaatccggaa
cgatcaaaacctttattagacaaaaatgaatgggattactggtatgaaggaaaagaggcc
accgcggatctaaaaggtacggatggcaagatttcagtcaaggctggtgatattcgtacc
gggggagcgtacaccacacgtttaagcaatatcgctgtctggaatacggttatgccaaat
tatgattattcgctacagaaatggtatgagtttttattagcatga
DBGET
integrated database retrieval system
