Mycolicibacterium madagascariense: MMAD_10170
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Entry
MMAD_10170 CDS
T06841
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MMAD_10170 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmag03400
]
MMAD_10170 (recD)
Enzymes [BR:
mmag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MMAD_10170 (recD)
DNA repair and recombination proteins [BR:
mmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMAD_10170 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
Helicase_RecD
UvrD-helicase
AAA_22
SH3_13
PhoH
nSTAND3
TraI_hel_assoc_N
AAA_28
AAA_16
Mg_chelatase
SRP54
AAA_29
AAA_5
TrwB_AAD_bind
MukB
SLFN-g3_helicase
ATPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BBZ26722
UniProt:
A0A7I7XBC7
LinkDB
All DBs
Position
complement(1060715..1062445)
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AA seq
576 aa
AA seq
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MTSVEPVDAADRRRAVAAAGLLAVFNEAGVLDAADVLVAQRLSALADETDERVTLAVALV
VRGLRAGSVCLDLRAVRAQVDEPDLPWPAVDGWLDAVWASPLLQPPHVLRRQADLLYLDR
YWREEQQVADDLRTMVSRRAEEPAVDVERLFPAGYDEQRAAAEIALSQRVTVLTGGPGTG
KTTTVARLLALFAGQPGSGARLRIALAAPTGKAAARLQEAVQLEIDKLDLVDQRRLSGLQ
ATTLHRLLGSRPDSSSRFRHHRGNRLPHDVIVVDETSMVSLTMMARLLEAVRPQSRLLLV
GDPDQLASVDAGAVLADLVDGLGAGAGSPVVALQTSHRFGESIGALAAAIRTGDADAALA
VLAAGGNHVEWLDVADPSDPLREVLLPQAMSLRQAAILGDANTALATLDEHRLLCAHRRG
PHGVQHWNRQVERWLTESTGEPIWSDWYVGRPVLVTANDYGLQLYNGDTGVTVNGPEGLR
AAIAGAAAAREFATSRLPDLETMYAMTIHKSQGSQAAEVTVLMPPVDSRLLTRELFYTAV
TRAKAKVRVVGSADEVRAAIEKRAVRATGLALRLRE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcggtcgaaccggtggacgccgcggaccggcgcagggccgtcgccgcggccggg
ctgctggccgtcttcaacgaggccggggtcctcgacgcggccgacgtgctcgtggctcag
cggttgagcgcactcgccgacgagaccgacgagcgcgtgacgctggcggtcgccctcgtg
gtgcgtggcctgcgggccgggtcggtgtgtctggacctgcgcgcggtgcgggcccaggtc
gacgagcccgacctgccgtggcccgcggtcgacggctggctcgacgcggtgtgggccagc
ccgctgctgcagccgccgcacgtcctgcgccgccaggcggacctgctgtacctcgaccga
tattggcgcgaggagcagcaggtagccgacgacctgcggacgatggtgtcgcgtcgcgcc
gaggaaccggccgtcgacgtcgaacgcctcttccccgccggctacgacgagcagcgcgca
gccgccgaaatcgcgctgtcgcaacgggttacggtcctgacgggcggaccgggcaccggc
aagacgacgaccgtcgcgcggctgctggcgctgtttgcgggccagccaggctcgggggcg
cggttgcgcatcgcgctggcggcgccgaccggcaaggcggccgcgcgcttgcaggaggcc
gtgcagctggagatcgacaagctggatctggtggatcagcgtcggctgtcggggctgcag
gcgacgacgctgcaccggctgctcggaagtagacccgacagctcgtcgcgctttcggcac
catcgtggcaatcggctgccgcacgacgtcatcgtcgtcgacgagacgtcgatggtgtcg
ctgacgatgatggcgaggctgctggaggcggtgcggccgcagtcgcgactgctcctcgtc
ggcgaccccgaccagctggcgtcggtggacgccggcgcggtgttggcggacctggtcgac
ggcctcggtgcgggtgccggctcacccgtggtcgcgctgcagacgtcgcaccggttcggc
gagtccatcggcgcgctcgcggcggcgattcgcaccggggacgccgacgccgcgctcgcg
gtgttggccgccggcggcaaccacgtcgagtggctggacgtcgcggacccgtcggacccc
ctgcgcgaagttctgctcccacaggcgatgtcgttgcgccaggcggccattctcggcgac
gcgaacaccgcactggcgacgctggacgaacaccgcctgctgtgtgcgcaccgccgcgga
ccgcacggtgtgcagcactggaaccgccaggtcgagcggtggttgacggagtcgacgggc
gagccgatctggtcggactggtacgtcggtcgtccggtgttggtgaccgccaacgactat
gggctgcagctgtacaacggcgataccggcgtcaccgtgaacggaccagaaggcctgcgt
gccgcgatcgccggtgcggccgcggcacgcgagttcgcgaccagccggctgccggacctc
gagaccatgtacgcgatgacgatccacaagagccagggctcccaggccgccgaggtgacg
gtgctcatgccccccgtcgactcgcggctgctgacccgagagttgttctacacggccgtc
actcgagccaaggccaaggtgcgcgtggtcgggtccgctgacgaggtccgagcggcgatc
gagaagcgcgccgtacgggccaccggcctggcgctgcgcctacgcgagtga
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