Mycolicibacterium madagascariense: MMAD_10180
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Entry
MMAD_10180 CDS
T06841
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MMAD_10180 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmag03400
]
MMAD_10180 (recB)
Enzymes [BR:
mmag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MMAD_10180 (recB)
DNA repair and recombination proteins [BR:
mmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMAD_10180 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
AAA_22
SH3_18
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBZ26723
UniProt:
A0A7I7XCT5
LinkDB
All DBs
Position
complement(1062442..1065738)
Genome browser
AA seq
1098 aa
AA seq
DB search
MDRFDLLGPLPATGSTTVLEASAGTGKTFALAGLVTRYVAEGAATLDQMLLITFSRSASQ
ELRDRVRRQITEAAAAFDDPSLIGDNDLVAHLVKGSDEERHDRRERLRDALATFDSATIA
TTHQFCQLVLKSLGVAGDSDSRVTLVESLLDHVTEVVDDLYLAHFGRQHDDPELSYPDAL
KLAREVVSNPATQLRPLDPPPDSTAAVRVGFAKDVLAELETRKRRLGILGYDDLLTRLAD
ALDAEDSPARQRMHQRWPIVMVDEFQDTDPVQWQIIDRAFSHRSTVVLIGDPKQAIYAFR
GGDIVTYLKAADTAGAKKTLGTNWRSDSVLVDALQAVLRGAQLGAPAIVVHDVEAANRGS
RLTGAPRGEPFRLRMVRREPFGRRGTQNVPIADFREHIGRDLANDIGALLASGAEFDGAP
VRAGDVAVIVERHLDARLCQRALGRAGIPAVYTGDSDIFASEAADDWLSLLEAFDQPHRA
GVVRAAAATMFFGKTAQELVDGGDALTDAIAETLREWAGHARERGVAAIFEAAQLAGMGD
RVLSWRDGERHMTDLAHMTQLLQDVAHRERHTLPALRDWLRSEREDRGGAGERNRRLDSD
AAAVQIMTVWASKGLQYPVVYLPFAFNRNVQERDLILFHDGSTRCLHVGGKESPDYREVE
RIGREESAGDDSRLTYVAMTRAQAQVVAWWAPAADEPNGGLSRLLRGRRPGELVVPNRCT
PPKINDDDAFARLREWEAVGGPTLEESVLIPVPPPPADPAPTGLEARHFHRSIDTTWRRT
SYSGLIRATETPGVSSEPEVVALDDEVGDLPLLEPPSGPQVPSPMAELPKGATFGTLMHA
VLETADPFAGDLAEELAVQIRQHSVWWPVDVPTEDLAAALVPMHDTPLGPLAGDVTLRQV
GLRDRLRELDFEFPLAGGDLRSTAPRIHLRDVGRLVAEHLPADDPLISYADRLTGAALGG
QSLRGYLNGSIDAVLRLSSPEGPRYVVVDYKSNWLGDGDGELTSADYERARLVEAMLHSD
YPLQALLYSVVLHRFLRWRQPGYDPQRHLGGVLYLFVRGMCGADTPIVDGHTAGVFDWQP
PASLIVATSELLDTGRSA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggaccgattcgatctgctgggccccctacccgcgacgggttcgacgaccgtgctggag
gcgagcgcgggcacgggcaagacgttcgcgctggccggtctggtgacgcggtacgtcgcc
gagggtgccgcgacgctcgatcagatgctgctcatcacgttcagccggtcggcgagccag
gagctccgcgaccgggtccgtcgccaaatcaccgaggccgcagccgcattcgacgacccc
tccctcatcggcgacaacgatctggtggcccacctcgtgaagggatccgacgaggagcgt
cacgacaggcgcgagcggttgcgcgacgcgttggccaccttcgactccgcgacgatcgcc
accacccaccagttctgccagctggtgctcaaatcgcttggcgtggctggtgattccgac
tcccgcgtcaccctggtggagagtctcctcgaccacgtcaccgaggtcgtcgacgacctg
tatctcgcacacttcgggcgtcagcacgacgatccggaactgtcctaccccgacgcgctt
aagctcgcgcgcgaggtcgtgagcaaccccgccacgcagctgcggccgctggacccgcca
cccgattcgacggccgcggtccgcgtcgggttcgccaaagacgtgctggccgaactggag
acccgcaagcgccgactcggcatcctcggctacgacgacctgctgacgcggctggccgat
gcgctcgacgccgaggactcccccgcccggcagcgtatgcaccagcgctggcccatcgtg
atggtcgacgaatttcaggacaccgatcccgtgcagtggcagatcatcgaccgggcattc
agccaccgctcgacggtcgtcctgatcggcgatcccaagcaggcgatctacgcgtttcgc
gggggtgacatcgtcacctacctgaaggcagccgacaccgcgggcgccaagaagacactc
ggcaccaactggcgcagcgacagcgtgctcgtcgacgcgctacaggccgtgctgcggggc
gcgcaactcggcgcccccgcgatcgtcgtgcacgacgtggaggcggccaaccgcggctcg
cggttgacgggcgccccgcgcggcgagccgttccggttgcgaatggtacgccgagaaccg
ttcggccgccggggaactcagaacgtcccgattgccgacttccgcgagcacatcggcagg
gatctcgccaacgacatcggggccctgctcgcgagcggcgccgagttcgacggcgcgccg
gtgcgcgccggcgacgtcgcggtcatcgtcgagcggcatctggacgcgcgactgtgccag
cgcgcgctggggcgggccgggatcccggccgtatacaccggcgattcggacatcttcgcc
tccgaagccgccgacgactggctgtccctgctcgaggcgttcgaccagccgcaccgcgcc
ggggtggtccgcgcggccgcagcgacgatgttcttcggcaagaccgcccaagagctggtc
gacgggggcgacgcgctgaccgacgcgatcgcagagacgttgcgggagtgggcgggtcat
gcccgcgagcgcggtgtcgccgccatcttcgaggccgcccaactggcgggcatgggcgat
cgcgtgctgtcgtggcgcgacggcgagcggcacatgaccgacctggcgcacatgacgcag
ctgctccaggacgtcgcgcatcgcgagcgccatacgctgccggcgctgcgggactggctg
cgctccgagcgcgaggaccgcggcggcgccggcgaacgcaatcgcaggctggacagcgac
gccgcagcggtgcagatcatgacggtgtgggccagcaaggggttgcaatatccggtcgtc
tacctaccgttcgccttcaaccgcaacgtccaggagcgcgacctgatcctgttccacgac
ggctcgacgcgctgcctgcacgtcggcggcaaggagagcccggattaccgcgaggtcgaa
cgcatcggccgcgaggagtccgccggggacgacagccgactgacctacgtcgcgatgacg
cgggcgcaggcccaggtggtggcgtggtgggcgcccgccgccgacgagcccaatggcggg
ctgtcgcggctgctgcgcggtcgacggcccggcgagctcgtcgtccccaaccggtgcacg
ccacccaagatcaacgacgatgacgccttcgcgcggttgcgggagtgggaggccgtcggc
ggaccgacgctcgaggagtcggtgctgatcccggtgccgcctccgcccgccgacccggcg
ccaacgggcttggaggccaggcactttcaccgctccatcgacacgacgtggcggcgcacc
tcgtactcggggctcatcagggcgaccgagacgcccggggtgagcagcgagcccgaggtc
gttgcgctcgacgacgaggtcggcgatctcccgctactggaaccgcccagcggcccccag
gtgccgtcaccgatggccgagctacccaagggcgccacgttcggcacgctgatgcacgcg
gtgttggagaccgccgaccccttcgccggcgatctggcggaggagttggcggtccagatc
cgccagcactcggtgtggtggccggtcgacgtgcccaccgaggatctggccgccgcactg
gtgccgatgcacgacacgccgctcggccccctcgcgggcgacgtgaccctgcgccaggtc
ggactgcgagaccggttgcgcgagttggacttcgagttcccactcgccggcggtgatctc
cgatccaccgcgccgcggattcatttgcgcgacgtcggccgcctggtggccgagcacctg
cccgccgacgatcccctcatctcctacgccgaccggctgaccggcgccgcgctgggcggc
cagtcgctgcgcgggtatctcaacggttcgatcgacgcggtgctgcgcctgtcctccccc
gagggaccccgctacgtggtggtcgactacaagtcgaactggctcggcgacggcgatggc
gaactgacgtccgcggactacgagcgcgcccggctcgtcgaggccatgctgcactcggac
tatccgctgcaggcgctgctgtacagcgtcgtgttgcaccgcttcctgcggtggcgtcaa
ccgggctacgacccgcagcgtcacctcggcggcgtgctgtacctgttcgtgcgtggaatg
tgcggcgcggatacgccaatcgtcgatggccacaccgcaggcgtcttcgactggcaaccg
ccggcgtcgctcatcgtggcgacgtccgagctgcttgacacggggcggtccgcgtga
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