Mycolicibacterium madagascariense: MMAD_26720
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Entry
MMAD_26720 CDS
T06841
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03030
DNA replication
mmag03430
Mismatch repair
mmag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMAD_26720 (dnaE1)
03430 Mismatch repair
MMAD_26720 (dnaE1)
03440 Homologous recombination
MMAD_26720 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmag03032
]
MMAD_26720 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mmag03400
]
MMAD_26720 (dnaE1)
Enzymes [BR:
mmag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMAD_26720 (dnaE1)
DNA replication proteins [BR:
mmag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMAD_26720 (dnaE1)
DNA repair and recombination proteins [BR:
mmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMAD_26720 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBZ28377
UniProt:
A0A7I7XGP4
LinkDB
All DBs
Position
2811659..2815213
Genome browser
AA seq
1184 aa
AA seq
DB search
MADSSAPRAGTSFVHLHNHTEYSMLDGAAKVKPMFAEAARLEMPAIGMTDHGNMFGASEF
YHAAIDVGIKPIIGVEAYIAPASRFDTKRVLWGDPSQKSDDVSGSGAYTHMTMVAENATG
LRNLFKLSSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHVDEAVA
AAAKWREIFGPENFFLELMDHGLDIERRVREGLLEVGRKLNIPPLATNDCHYVTRDASRN
HEALLCVQTGKTLSDPTRFKFDGDGYYLKSAAEMRALWDDQVPGACDSTLLIAERVQPYT
DVWAPKDRMPIFPVPEGHDQASWLHHEVMAGLERRFPGAVGRDYVERAEYEIKVICDKGF
PSYFLIVADLINYAKSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERP
SAPDIDIDFDDRRRGEMLRYAANRWGSDRVAQVITFGTIKTKAALKDSARVNYGQPGFAI
ADRITKALPPPIMAKDIPLSGITDPTHERYKEAAEVRSLLDTDPDVRAIYETARGLEGLV
RNAGVHACAVIMSSEPLIEAIPLWKRPQDGAVISGWDYPSCEAIGLLKMDFLGLRNLTII
GDCIENIRANRGIDVDLESLNLDDPRAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFN
DIVAVLALYRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLREILSETYGLIVYQEQI
MFIAQKVAGYSMGKADALRKAMGKKKLEVLEAEYKGFREGMTANGFSEAAVKALWDTILP
FAGYAFNKSHAAGYGLVSYWTAYLKANFPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIT
VLPPDVNESELNFASVGVDIRFGLGAVRNVGANVVASLIATRNDKGKYTDFSDYLNKIEV
TACNKKVTESLIKAGAFDSLGHSRKGLFLIHTDAVDSVLGTKKAEAMGQFDLFGGADTAT
DAVFAIKVPDEEWEDKHKLALEREMLGLYVSGHPLDGVAHLLASQVDTAIPAILDGDVAN
EAQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSTFGADIADDTVVIV
SGKVNSRDDRLSLIANDLIVPDFTNAQADRPVAVSLPTRQCTVEKVGALKQVLANHPGTS
QVRLRLISGDRITTLELDQGLRVTPSSALMGDLKALLGPGCLGG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcgtccgctccccgcgccggcacgtcgttcgtgcacctgcacaaccacacc
gaatactcgatgctggacggtgccgcgaaggtcaagcccatgttcgccgaagccgcgcgg
ttggagatgcccgcaatcggcatgaccgaccacggcaacatgttcggggccagcgagttc
taccacgcggcaatcgatgtgggcatcaagccgatcatcggcgtcgaggcgtacatcgcg
cccgcgtcgcgcttcgacaccaagcgcgtgctgtggggtgaccccagccagaagtccgac
gacgtctccggcagcggcgcctacacgcacatgacgatggtcgcggagaacgcgaccggg
ctgcgcaacctgttcaagctgtcgtcgctggcgtccttcgagggccagctcggcaagtgg
tcccggatggacgccgagatcatcgccgaacacgccgagggcatcatcgcgaccaccggc
tgcccgtccggtgaggtccagaccaggctgcggctgggtcacgtcgacgaggcggtggcc
gcggcggccaagtggcgcgagatcttcgggccggagaacttcttcctcgagctcatggac
cacggtctcgacatcgagcgccgggtccgcgagggtctgctcgaggtcggccgcaagctg
aacatcccgccgctggccaccaacgactgccactacgtcacccgcgacgcctcgcgcaac
cacgaggcgctgctgtgcgtgcagaccggcaagacgctgtcggatcccacccgcttcaag
ttcgacggtgacggctactacctgaagtccgccgcggagatgcgggcgctatgggacgac
caggtccccggggcctgcgactcgacgctgctgatcgccgaacgcgtccagccgtacacc
gacgtgtgggcgccgaaggaccggatgccgatcttcccggtacccgagggacacgaccaa
gcgtcgtggctgcatcacgaggtgatggccggcctggagcgccgatttccgggagccgtc
gggcgcgactacgtcgagcgcgccgaatacgagatcaaggtcatctgcgacaagggcttt
ccgtcgtacttcctcatcgtggccgacctcatcaactacgcgaagtccgtcgacatccgc
gtcggccccggccgtggttcggcggcggggtcgctggtggcctacgcgatgggcatcacc
aacatcgacccgatcccgcacggcctgctcttcgagcggttcctcaaccccgaacggccg
tcggcacccgacatcgacatcgacttcgacgatcgtcgccgcggggagatgctgcgctac
gccgccaaccgctggggcagcgaccgggtggcccaggtcatcacgttcggcaccatcaag
accaaggcggcactgaaggattcggctcgggtcaactacggccagccgggcttcgcgatc
gccgaccggatcaccaaggcgctgccgccgccgatcatggccaaggacattccgctctcg
gggatcaccgaccccacccacgagcggtacaaggaggccgccgaggtccgcagcctgctc
gacaccgaccccgacgtccgggcgatctacgagaccgcgcgcgggctggaggggctggtg
cgcaacgccggcgtgcacgcgtgcgcggtcatcatgagctccgagccgctcatcgaggcg
atcccgctgtggaagcggccgcaggacggcgcggtcatcagcggctgggactacccgtcg
tgcgaggccatcggcctgctgaagatggacttcctcggcctgcgcaacctgacgatcatc
ggcgactgcatcgagaacatccgcgccaaccgcggcatcgacgtcgacctggagtcgctc
aacctcgacgaccccagggcctatgaactgctgggccgcggtgacaccctcggtgtgttc
cagctcgacggtggcccgatgcgcgatctgctgcgccgcatgcagcccaccgagttcaac
gacatcgtcgcggtgctcgcgctgtaccgccccggcccgatgggcatgaacgcccacaac
gactacgccgaccgcaagaacggtcggcaggccatcaagccgatccatcccgagctggag
gaaccgctgcgggagatcctctcggaaacctacggcctgatcgtctaccaagagcagatc
atgttcatcgcccagaaggtcgcgggctactcgatgggcaaggccgacgcgctgcgcaag
gccatgggcaagaagaagctcgaggtgctcgaggcggagtacaagggcttccgcgagggc
atgaccgccaacgggttctccgaggccgcggtgaaggcgttgtgggacaccatccttccg
ttcgccgggtatgcgttcaacaagtcccacgcggccggctacgggctggtctcctactgg
acggcgtacctcaaggcgaacttccccgccgagtacatggcgggcctgctcacctcggtc
ggcgacgacaaggacaaggccgcggtgtatctcgccgactgccgcaggctcggcatcacg
gtgctgccgcccgacgtcaacgagtccgagctcaacttcgcctcggtgggcgtggacatc
cgcttcggactcggcgccgtgcgcaacgtcggcgccaacgtcgtggcgtcgctgatcgcc
acccgcaacgacaagggcaagtacaccgacttctccgactacctcaacaagatcgaggtc
accgcgtgcaacaagaaggtgacggaatcgctgatcaaggccggggccttcgactcgctc
ggccactcccgcaagggcctgttcctcatccacaccgatgccgtcgactcggtgctcggg
acgaagaaggccgaggcgatgggtcagttcgacctcttcggcggggccgatacggcgacg
gacgccgtcttcgcgatcaaggtgcccgacgaggagtgggaggacaagcacaagctggcc
ctcgagcgagagatgttggggctctacgtgtccgggcatccgctcgacggcgtggcgcac
ctgctggccagccaggtcgacaccgccatccccgcgatcctggacggcgacgtcgccaac
gaggcccaggtgcgcgtcgggggcatcctggcgtcggtcaaccgcagggtgaacaagaac
ggaatgccctgggcgtcagcacaattggaggatctcaccggcggcatcgaggtgatgttc
ttcccgcacacctattcgacgttcggcgccgacatcgccgacgacaccgtggtgatcgtc
agcggaaaggtgaactcccgcgacgaccggctctcgctgatcgccaacgatctcatcgtg
ccggacttcaccaacgcccaggccgatcggccggtggcggtcagcctgcccacccggcag
tgcacggtcgagaaggtcggcgccctcaagcaggtgctcgccaaccaccccggcacgtca
caggtgcggctgcggttgatcagcggtgaccgcatcacgaccctcgaactcgatcagggg
ttgcgggtgacgccgtcctcggcactgatgggggatctcaaggcgttgctcggtcccggc
tgcctcgggggctga
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