Mycolicibacterium madagascariense: MMAD_27370
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Entry
MMAD_27370 CDS
T06841
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03030
DNA replication
mmag03410
Base excision repair
mmag03420
Nucleotide excision repair
mmag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMAD_27370
03410 Base excision repair
MMAD_27370
03420 Nucleotide excision repair
MMAD_27370
03440 Homologous recombination
MMAD_27370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmag03032
]
MMAD_27370
03400 DNA repair and recombination proteins [BR:
mmag03400
]
MMAD_27370
Enzymes [BR:
mmag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMAD_27370
DNA replication proteins [BR:
mmag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMAD_27370
DNA repair and recombination proteins [BR:
mmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MMAD_27370
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMAD_27370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BBZ28442
UniProt:
A0A7I7XGV0
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All DBs
Position
2886905..2889601
Genome browser
AA seq
898 aa
AA seq
DB search
MSPAKTDTKPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLRDEQP
THIAAAFDVSRQTFRSEKYPEYKAGRSATPDEFRGQIDITKEVLVALGITALAEPGFEAD
DIIATLATQAEHEGYRVLVVTGDRDALQLVSPDVTVLYPRKGVSELTRFTPDAVVEKYGL
TPTQYPDFAALRGDPSDNLPGIPGVGEKTASKWIVEYGSLQALVEKVDTVKGKVGEALRA
NLSHVILNRDLTELVKDVPLAQTPDTLRMMPWDRDQIHRLFDDLEFRVLRDRLFETLASA
DPEVEQGFDVKGGVLEPGQLAAWLAEHATGKRTGLAVVGTHLAFDSDATALAIVSADGEG
CYLDTTTLGQEDEAALMAWLADEDAPKSLHEAKLAMHDLEGRGWTLAGVTSDTALAAYLV
RPGQRSFALDDLAVRYLKRELRAENPEQQQLSLLDDNSGVDDQAVQTLLLRASAVADLAD
ALDEELARIDSTALLSQMELPVQRVLAKLEATGIAVDLDLLGQLQSQFANLIRDAAEAAY
EVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQGLFDKTGHPFLQHLLAH
RDATRLKVTVDGLLNAVGSDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRQIREG
FVVGSGYAELMTADYSQIEMRIMAHLSKDDGLIEAFNTGEDLHSFVASRAFGVPIDEVTA
ELRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKLQMDAYFARFGGVRDYLQSVVDQARK
DGYTSTVLGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIKVAMIDTETAIREAG
LQSRMLLQVHDELLFEVADGEREALDALVRDKMGGAYPLDVPLEVSVGYGRSWDAAAH
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccagccaagaccgacaccaagcccacactgatgctgttggacggcaattcgctg
gcgtttcgcgccttctacgcgctgcccgcggagaacttcaagacccagggcgggttgacc
acgaacgcggtctacggcttcacggcgatgttgatcaacctgctgcgcgacgagcaaccc
acgcacatcgccgcggcgttcgacgtgtcgcggcagaccttccggtccgagaagtacccg
gagtacaaggcgggccggtcggccacccccgacgagttccgcggccagatcgacatcacc
aaggaggtgctggtcgcactgggcatcaccgccctggccgagccgggcttcgaagccgac
gacatcatcgccacgctggccacgcaggccgagcacgagggctaccgcgtcctcgtcgtc
accggcgaccgcgacgcgctgcaactggtcagccccgacgtgaccgtgctgtacccgcgc
aagggagtgtcggagctgacgcggttcacccccgatgcggtcgtggagaagtacggcctg
acgccgacgcagtacccggacttcgccgcgctgcgcggtgaccccagtgacaatctgccc
ggcatcccgggcgtgggggagaagacggcgtcgaagtggatcgtcgaatacgggtcgctg
caggccctcgtcgagaaggtcgacaccgtgaagggcaaggtcggagaggcgttgcgcgcc
aacctgtctcacgtcatcctcaaccgcgacctgaccgaactggtcaaggacgtgcccctg
gcccagacgccggacacgctgcggatgatgccgtgggaccgcgaccagatccaccggctc
ttcgacgacctcgagttccgcgtgctgcgcgaccgcctattcgagacgctggcgtcggca
gaccccgaggtggagcagggcttcgacgtgaagggcggggtgctggagcccggccagctc
gccgcgtggctcgccgagcatgccaccggaaagcgcaccgggctggccgtcgtcggcacc
catctggcgttcgactccgacgccacggcgctggccatcgtgtcggccgacggcgagggc
tgctatctcgacaccacgacgctgggccaggaggacgaggcggccctgatggcctggctg
gccgacgaggacgcaccgaagtcgctgcacgaggcgaagctcgcgatgcacgacctcgag
ggcaggggctggacgctggcgggcgtcacctccgacaccgcgctggcggcctatttggtg
cgacccgggcagcgcagctttgccctcgacgatctcgcggtgcgctacctcaaacgggag
ctgcgcgcggaaaaccccgagcagcaacaactttcgctactcgatgacaacagcggcgtc
gacgaccaggccgtgcagacgctgctgctgcgagcctccgcagtcgccgacctcgccgac
gccctcgacgaggagctggcgaggatcgactccacggcgctgctgagccagatggagctg
cccgtgcagcgggtgctcgccaagctcgaggcgacgggcatcgccgtggacctcgacctg
ctcggtcagttgcagagccagttcgcgaacctcatccgcgacgccgcggaggcggcctac
gaggtcatcggcaagcagatcaacctcgggtctcccaagcagctgcaggtggtgctgttc
gacgagctcgagatgccgaagaccaagcgcacgaagaccggctacacaaccgacgcggat
gcgctgcagggtctgttcgacaagaccggacacccgttcctgcagcatctgctggcccac
cgcgatgccacccggctcaaggtgaccgtcgacgggctcctgaacgccgtgggctcggac
ggacgaatccacacgacgttcaatcagacgatcgcggcgacgggtcggctgtcctccacc
gaacccaacctgcagaacatcccgatccgcaccgaggcgggccgccagatccgcgagggc
ttcgtggtggggagcggttacgccgagctgatgacggcggactacagccagatcgagatg
cggatcatggcgcacctgtcgaaggacgacgggctcatcgaggcgttcaacaccggcgag
gacctgcactcgttcgtggcctcccgggcattcggcgtgccgatcgacgaggtgacggcc
gaactgcggcgccgggtcaaggccatgtcctacggtctggcgtacgggctcagcgcctac
ggcctggccgcgcagctgaagatctccaccgaggaggccaagctgcagatggacgcctac
ttcgcgcggttcggcggagtccgcgactacctgcagtcggtcgtcgaccaggcgcgcaag
gacgggtacacctcgaccgtgctcggcaggcggcgctacctaccggagttggacagcagc
aatcgcaacgtcagggaggcagcggagcgggccgcgctgaacgccccgatccagggcagt
gccgccgacatcatcaaggtcgcgatgatcgacaccgagaccgccatccgcgaggcgggc
ttgcagtcgcgcatgctgctgcaggtgcacgacgaattgctgttcgaggtggccgacggc
gaacgcgaggccctcgacgcactggtccgcgacaagatgggcggcgcctatccgctcgac
gtgcccctggaggtctcggtggggtacggccgcagctgggacgctgcggcgcactag
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