Mycolicibacterium madagascariense: MMAD_40610
Help
Entry
MMAD_40610 CDS
T06841
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAD_40610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmag03021
]
MMAD_40610
03019 Messenger RNA biogenesis [BR:
mmag03019
]
MMAD_40610
Transcription machinery [BR:
mmag03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MMAD_40610
Messenger RNA biogenesis [BR:
mmag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MMAD_40610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
Spore_III_AA
CDC27
AAA_22
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
BBZ29766
UniProt:
A0A7I7XKQ0
LinkDB
All DBs
Position
complement(4269072..4271207)
Genome browser
AA seq
711 aa
AA seq
DB search
MTDTDLITADGSSDDVDLSNPVNSPIVEAVSPAPAEPAPANSVVASGDRPTSLTAMVLPD
LRALAGQLGVKGSSGMRKSELIAAIREHRGDANGAAAAAHAAEQATAEPAAAPPRRERRS
ASRSAGAAAAAEAKAATEQAAPQQADATEPSAAVTEAAPEAKAPKAEAPKTETKVESKAD
APVEQGTQDKADEKVADKPDKAGERTERTRGSGQSEGQRTNDRQNNGGGNANNNGGGGNN
NGNANNNGGGGNNNGNANNNGGGNNANNNTGGNANNNANNNDDDDDGRGGRRGRRFRDRR
RRGERGDTQGGGNNDRDTELREDDVVQPVAGILDVLDNYAFVRTSGYLAGTNDVYVSMNM
VRKNGLRRGDAILGAVRVAREGEGGGGGGGNQNPRQKFNPLVRLDSVNGGPVEDARNRPE
FQKLTPLYPNQRLRLETKSELLTTRVIDLIMPIGKGQRALIVSPPKAGKTMVLQSIANAI
TTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTAVAELAIERAKRLVE
QGRDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEDGGSLTI
IATALVETGSMGDTVIYEEFKGTGNAELKLDRKIAERRVFPAVDVNPSNTRKDELLLSSD
EFAVVHKLRRVLSGLDSHQAIDLLMSQLRKTKNNYEFLVQVSKNTPGTDND
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctgacggcagcagcgacgacgtcgacctgtcgaac
cccgtgaattcaccaatcgtggaagcggtttcgccggcaccggccgagcctgccccggcg
aattcggtcgtggcctcgggtgaccgccccacctcgctgaccgcgatggtgctccccgac
ctgcgggcactggcgggtcagctgggcgtgaagggctcctcggggatgcgcaagagcgag
ctcatcgccgccatccgcgaacaccgcggcgacgccaacggtgcggccgccgcagcgcac
gccgccgaacaggccaccgccgaacccgccgccgcgccgccgcgtcgcgagcgtcgcagt
gcctcccgcagtgccggtgccgcggccgccgccgaggcgaaggccgccaccgagcaggcc
gctccgcagcaggccgacgccacggagccatcggccgccgtcaccgaggccgcgccggag
gccaaggcccccaaggccgaggctcccaagaccgagacgaaggtcgagtccaaggccgac
gcccccgtcgagcagggcacccaggacaaggccgacgagaaggtcgccgacaagccggac
aaggccggcgagcgcaccgagcgcacccgcggttccgggcagtccgagggccagcgcacc
aacgaccgccagaacaacggcggcggcaacgcgaacaacaacggcggcggcggtaacaac
aacggcaacgccaacaacaacggcggcggcggtaacaacaacggcaacgccaacaacaac
ggcggcggcaacaacgccaacaacaacaccggcggcaatgccaacaacaacgccaacaac
aacgacgacgacgacgatggtcgcggcggacggcgtggtcgccgcttccgcgaccgcagg
cggcgtggcgagcggggcgacactcagggcggcggcaacaacgaccgcgacaccgagctc
cgcgaggacgacgtcgtgcagcccgtggcgggcatcctcgacgtgctcgacaactacgcc
ttcgtgcggacctccggctacctcgcgggcaccaacgacgtctacgtctccatgaacatg
gtgcgcaagaacggcctgcgccgtggcgacgccatcctcggcgcggtccgcgtcgcccgt
gagggcgagggcggcggcggtgggggcggcaaccagaacccgcgccagaagttcaacccg
ctggtgcggctggactcggtcaacggtgggcccgtcgaagacgccaggaatcgtcccgag
ttccagaagctgacgccgctctacccgaaccagcggctgcgtctggagaccaagtcggag
ctcctgacgacccgcgtcatcgacctgatcatgccgatcggcaagggtcagcgcgcgctg
atcgtgtcgccgcccaaggcgggcaagacgatggtgctgcagagcatcgccaacgcgatc
acgaccaacaaccccgagtgccacctgatggtggtgctggtcgacgagcgacccgaagag
gtcaccgacatgcagcgctcggtcaagggtgaggtcattgcctccaccttcgaccggccg
ccgtcagaccacaccgcggtcgcggagttggccatcgagcgcgccaagcgtctcgtcgag
caggggagggacgtcgtcgtgttgctcgactccatcacccgtctcggccgcgcctacaac
aacgcgtcgcccgcgtcgggccgcatcctctccggtggtgtcgactcgacggcgctgtac
ccgccgaagcgcttcctcggcgcggcccgcaacatcgaagacggcggttcgctgacgatc
atcgccaccgcgctggtcgaaaccggctcgatgggtgacaccgtcatctacgaggagttc
aagggcaccggcaacgccgagctcaagctcgaccgcaagatcgccgagcgtcgcgtgttc
cccgcggtggacgtcaacccgtccaacacccgcaaggacgagctgttgctctcctccgac
gagttcgccgtcgtgcacaagctgcgccgggtgctgtccggtttggactcccaccaggcc
atcgatctgctgatgagccagctgcgcaagacgaagaacaactacgagttcctggtgcag
gtctcgaagaacacgccgggcaccgacaacgactag
DBGET
integrated database retrieval system