KEGG   Mycolicibacterium madagascariense: MMAD_40610
Entry
MMAD_40610        CDS       T06841                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
mmag  Mycolicibacterium madagascariense
Pathway
mmag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MMAD_40610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmag03021]
    MMAD_40610
   03019 Messenger RNA biogenesis [BR:mmag03019]
    MMAD_40610
Transcription machinery [BR:mmag03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MMAD_40610
Messenger RNA biogenesis [BR:mmag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MMAD_40610
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 NACHT Spore_III_AA CDC27 AAA_22 CoV_NSP2_C
Other DBs
NCBI-ProteinID: BBZ29766
UniProt: A0A7I7XKQ0
LinkDB
Position
complement(4269072..4271207)
AA seq 711 aa
MTDTDLITADGSSDDVDLSNPVNSPIVEAVSPAPAEPAPANSVVASGDRPTSLTAMVLPD
LRALAGQLGVKGSSGMRKSELIAAIREHRGDANGAAAAAHAAEQATAEPAAAPPRRERRS
ASRSAGAAAAAEAKAATEQAAPQQADATEPSAAVTEAAPEAKAPKAEAPKTETKVESKAD
APVEQGTQDKADEKVADKPDKAGERTERTRGSGQSEGQRTNDRQNNGGGNANNNGGGGNN
NGNANNNGGGGNNNGNANNNGGGNNANNNTGGNANNNANNNDDDDDGRGGRRGRRFRDRR
RRGERGDTQGGGNNDRDTELREDDVVQPVAGILDVLDNYAFVRTSGYLAGTNDVYVSMNM
VRKNGLRRGDAILGAVRVAREGEGGGGGGGNQNPRQKFNPLVRLDSVNGGPVEDARNRPE
FQKLTPLYPNQRLRLETKSELLTTRVIDLIMPIGKGQRALIVSPPKAGKTMVLQSIANAI
TTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTAVAELAIERAKRLVE
QGRDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEDGGSLTI
IATALVETGSMGDTVIYEEFKGTGNAELKLDRKIAERRVFPAVDVNPSNTRKDELLLSSD
EFAVVHKLRRVLSGLDSHQAIDLLMSQLRKTKNNYEFLVQVSKNTPGTDND
NT seq 2136 nt   +upstreamnt  +downstreamnt
gtgactgatacggacctcatcacggctgacggcagcagcgacgacgtcgacctgtcgaac
cccgtgaattcaccaatcgtggaagcggtttcgccggcaccggccgagcctgccccggcg
aattcggtcgtggcctcgggtgaccgccccacctcgctgaccgcgatggtgctccccgac
ctgcgggcactggcgggtcagctgggcgtgaagggctcctcggggatgcgcaagagcgag
ctcatcgccgccatccgcgaacaccgcggcgacgccaacggtgcggccgccgcagcgcac
gccgccgaacaggccaccgccgaacccgccgccgcgccgccgcgtcgcgagcgtcgcagt
gcctcccgcagtgccggtgccgcggccgccgccgaggcgaaggccgccaccgagcaggcc
gctccgcagcaggccgacgccacggagccatcggccgccgtcaccgaggccgcgccggag
gccaaggcccccaaggccgaggctcccaagaccgagacgaaggtcgagtccaaggccgac
gcccccgtcgagcagggcacccaggacaaggccgacgagaaggtcgccgacaagccggac
aaggccggcgagcgcaccgagcgcacccgcggttccgggcagtccgagggccagcgcacc
aacgaccgccagaacaacggcggcggcaacgcgaacaacaacggcggcggcggtaacaac
aacggcaacgccaacaacaacggcggcggcggtaacaacaacggcaacgccaacaacaac
ggcggcggcaacaacgccaacaacaacaccggcggcaatgccaacaacaacgccaacaac
aacgacgacgacgacgatggtcgcggcggacggcgtggtcgccgcttccgcgaccgcagg
cggcgtggcgagcggggcgacactcagggcggcggcaacaacgaccgcgacaccgagctc
cgcgaggacgacgtcgtgcagcccgtggcgggcatcctcgacgtgctcgacaactacgcc
ttcgtgcggacctccggctacctcgcgggcaccaacgacgtctacgtctccatgaacatg
gtgcgcaagaacggcctgcgccgtggcgacgccatcctcggcgcggtccgcgtcgcccgt
gagggcgagggcggcggcggtgggggcggcaaccagaacccgcgccagaagttcaacccg
ctggtgcggctggactcggtcaacggtgggcccgtcgaagacgccaggaatcgtcccgag
ttccagaagctgacgccgctctacccgaaccagcggctgcgtctggagaccaagtcggag
ctcctgacgacccgcgtcatcgacctgatcatgccgatcggcaagggtcagcgcgcgctg
atcgtgtcgccgcccaaggcgggcaagacgatggtgctgcagagcatcgccaacgcgatc
acgaccaacaaccccgagtgccacctgatggtggtgctggtcgacgagcgacccgaagag
gtcaccgacatgcagcgctcggtcaagggtgaggtcattgcctccaccttcgaccggccg
ccgtcagaccacaccgcggtcgcggagttggccatcgagcgcgccaagcgtctcgtcgag
caggggagggacgtcgtcgtgttgctcgactccatcacccgtctcggccgcgcctacaac
aacgcgtcgcccgcgtcgggccgcatcctctccggtggtgtcgactcgacggcgctgtac
ccgccgaagcgcttcctcggcgcggcccgcaacatcgaagacggcggttcgctgacgatc
atcgccaccgcgctggtcgaaaccggctcgatgggtgacaccgtcatctacgaggagttc
aagggcaccggcaacgccgagctcaagctcgaccgcaagatcgccgagcgtcgcgtgttc
cccgcggtggacgtcaacccgtccaacacccgcaaggacgagctgttgctctcctccgac
gagttcgccgtcgtgcacaagctgcgccgggtgctgtccggtttggactcccaccaggcc
atcgatctgctgatgagccagctgcgcaagacgaagaacaactacgagttcctggtgcag
gtctcgaagaacacgccgggcaccgacaacgactag

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