Mycolicibacterium madagascariense: MMAD_41270
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Entry
MMAD_41270 CDS
T06841
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAD_41270 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmag03019
]
MMAD_41270 (deaD)
03009 Ribosome biogenesis [BR:
mmag03009
]
MMAD_41270 (deaD)
Enzymes [BR:
mmag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MMAD_41270 (deaD)
Messenger RNA biogenesis [BR:
mmag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMAD_41270 (deaD)
Ribosome biogenesis [BR:
mmag03009
]
Prokaryotic type
rRNA helicases
MMAD_41270 (deaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Transketolase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBZ29832
UniProt:
A0A7I7XL97
LinkDB
All DBs
Position
complement(4344557..4346239)
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AA seq
560 aa
AA seq
DB search
MTSEEPDATSAELTFADLQIHPSVLQALADVGYESPSAIQAATIPPMMAGSDVVGLAQTG
TGKTAAFAIPILSRIDTSSRTTQALVLAPTRELALQVAEAFGRYGAHLSVNVLPVYGGSS
YGPQLAGLKRGAQVVVGTPGRVIDHLEKGSLDVSHLDYMVLDEADEMLQMGFAEDVERIL
SETPEYKQVALFSATMPPAIRKITSKYLHDPVQVTVKSKTATAENISQRYIQVAGPRKMD
ALTRLLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIAQAVRERTISQLKDG
TIDILIATDVAARGLDVDRISHVLNYDIPHDPESYVHRIGRTGRAGRSGAAVLFVTPREK
HLLNSIERVSRQKLVEAQLPSVDDVNDKRVEKFRESITEALNAPGIELFRRLIEGYERDF
NVPTAEIAAALAVQSRGGGEFLMTEPPPEKRRERPDRDAGGDGPPRRQRDRNRTDLATYR
IAVGKRHKVGPGSIVGAIANEGGLHRSDFGHITIKMDHSLVELPAKMSRETLKKLEHTRI
SGVLIDLKQDRGPSHHHKPK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgaagaacccgacgcgacgagcgcggaactgacctttgctgacctgcagatt
cacccctcggtgctgcaggccctcgccgacgtcggttacgagtcgccgtccgccatccag
gccgccacgatcccgcccatgatggcgggctcggacgtggtcggcctcgcgcagaccgga
acgggcaagaccgcggccttcgccatcccgatcctgtcgcgcatcgacacctcgagccgc
accacgcaggccctcgtcctggcgccgacccgcgaactggccctccaggtcgccgaggcc
ttcgggcgctacggcgcccacctgtcggtgaacgtgctgccggtctacggcggctcctcc
tacggcccgcagctggccggcctcaagcgcggcgcgcaggtcgtggtcggcacgcccggc
cgagtgatcgaccacctggagaaggggagcctcgacgtctcgcacctggactacatggtg
ctcgacgaggccgacgagatgctgcagatgggcttcgccgaagacgtcgaacgcatcctg
tccgagacgcccgagtacaagcaggtggcgctgttctcggccaccatgccgcccgccatc
cgcaagatcacctcgaagtacctgcacgaccccgtccaggtgacggtgaagtcgaagacc
gcgacggccgagaacatctcgcagcgctacatccaggtcgccgggccccgcaagatggac
gccctgacccggctgctcgaggtcgagccgttcgaggcgatgatcgtgttcgtccgcacc
aagcaggccaccgaggaggtcgcggaaaagcttcgcgcgcgcggcttctcggccgcggcg
atcaacggcgacatcgcccaggccgtccgcgaacgcaccatctcccagctcaaggacggg
acgatcgacatcctgatcgccaccgacgtggcggcgcgcgggctcgacgtcgaccgcatc
tcgcacgtgctgaactacgacatcccgcacgaccccgagtcctacgtgcaccgcatcggc
cgcaccggacgggccgggcgctccggcgccgcggtgctgttcgtcaccccgcgcgagaag
cacctgctgaactcgatcgaacgggtgtcgcggcagaagctcgtcgaggcgcagttgccg
tcggtcgacgacgtcaacgacaagcgcgtggagaagttcagggagtcgatcaccgaggcg
ctcaacgcgcccggaatcgagttgttccgcaggttgatcgagggttacgagcgcgacttc
aacgtgcccacggcggagatcgccgcggcgctggccgtgcagagccgcggcggtggcgag
ttcctgatgaccgaaccgccgccggagaagcgccgggagcgtcccgatcgcgacgcgggc
ggggacggcccgccgcgccggcagcgcgaccgcaaccgcaccgatctggcgacctaccgc
atcgccgtcggcaagcgccacaaggtcggtccgggttccatcgtgggcgcgatcgccaac
gaaggtgggttgcaccgcagcgacttcgggcacatcaccatcaagatggaccactcgctc
gtcgaactgccggcgaagatgtccagggagaccctgaagaaactcgagcacacccgcatc
tcgggcgtgctgatcgacctcaagcaggatcgtggaccgagtcaccatcacaagccgaag
tga
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