Mycolicibacterium madagascariense: MMAD_45210
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Entry
MMAD_45210 CDS
T06841
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMAD_45210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmag03400
]
MMAD_45210
Enzymes [BR:
mmag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MMAD_45210
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMAD_45210
DNA repair and recombination proteins [BR:
mmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMAD_45210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Ribosomal_S13
TMEM106_N
DUF7577
TGT_C2
Maf_N
Motif
Other DBs
NCBI-ProteinID:
BBZ30226
UniProt:
A0A7I7XLY3
LinkDB
All DBs
Position
complement(4752782..4753648)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGLPVGRVDVAALSVLKTFDPPITALTGHTVTGAHRWGKYLG
LQVGDLHLITHLSRAGWLRWSDALSATPLRPGGKSPIAMRVHLGPPGQAPGFDLTEAGTQ
KRLAVWLVDDPFAIPQIASLGPDALSLSPDDLTAVLKGNTGRIKTVITDQKVIAGIGNAY
SDEILHVAKISPFASANKLTDAQLGALHDAMITVLTDAVSRSVGQGAATLKGEKRSGLRV
HARTGMPCPVCGDTVREVSFVDKSFQYCPTCQTNGRILADRRMSKLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccccgaggtcgaagccctcgccgaccacctccgtcgtcacgccgtcggc
ctgccggtggggcgcgtcgacgtcgcggcgctgtccgtgctcaagaccttcgacccaccg
atcaccgcgctgacgggccacaccgtcaccggcgcccaccggtggggcaagtacctgggc
ctgcaggtcggtgacctgcacctgatcacccacctgtcgcgggcgggctggctgcggtgg
tccgacgccctgtcggcgacgccgctgcggcccggcggcaagagccccatcgcgatgcgc
gtccacctcggcccgccggggcaggcgccgggcttcgacctgaccgaggccgggacccag
aagcggctggccgtctggctcgtcgacgatccgttcgcgattccccagatcgcctcgctc
ggcccggacgcgctgtcgctgagccccgacgacctcaccgcggtgctcaagggcaacacc
ggtcgcatcaagaccgtcatcaccgaccagaaggtcatcgcgggcatcggcaacgcctac
agcgacgagatcctgcacgtcgcgaagatctccccgttcgccagcgccaacaagctgacc
gacgcgcagctgggcgcgctgcacgacgcgatgatcaccgtgctcaccgacgcggtgtcg
cggtcggtcggccagggcgccgcgacgctcaagggcgagaagcgttcggggttgcgggtg
cacgcccgcaccgggatgccgtgcccggtgtgcggtgacaccgtccgggaggtgtcgttc
gtcgacaagtcgttccagtactgcccgacgtgtcagaccaacggacgcatcctcgccgac
cggcgcatgtcgaagctgctcaagtag
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