Mycolicibacterium madagascariense: MMAD_46340
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Entry
MMAD_46340 CDS
T06841
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMAD_46340
09124 Replication and repair
03420 Nucleotide excision repair
MMAD_46340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmag03021
]
MMAD_46340
03400 DNA repair and recombination proteins [BR:
mmag03400
]
MMAD_46340
Enzymes [BR:
mmag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMAD_46340
Transcription machinery [BR:
mmag03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MMAD_46340
DNA repair and recombination proteins [BR:
mmag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MMAD_46340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
BBZ30339
UniProt:
A0A7I7XM83
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All DBs
Position
4866306..4867955
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYSVPQPLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTIIVHASERGHIKQMLLKIGWPAEDLAGYVDGEAHPISLAQDGW
ELRDYQEMAADSFWAGGSGVVVLPCGAGKTIVGAAAMAKAGATTLILVTNTVAGRQWKRE
LIARTSLTEDEIGEYSGERKEVRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTENERMLYATAEPEERYKLCSTAHTKVAVVKSILDRHPGEPTLVIGAYLD
QLDELGRELDAPVIQGSTKTAERETLFQAFRTGEIRTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggccctctgatcgtgcagtccgacaagaccgtgctgctcgaagtcgaccac
gagctcgcgggtgcggcgcgggcggcgatcgctcccttcgccgaactcgaacgcgcgccc
gagcacatccacacctaccgcatcacgcccctggcgctatggaacgcgcgggccgcgggg
cacgacgccgagcaggtcgtcgacgccctggtgtcgttctcgcgctactcggtgccgcag
ccgctgctggtggacatcgtcgacaccatggcgcgctacggtcgcctgcaattggtgaag
agccccgtgcacggtctggtgctggtgagcctggaccgcgcggtgctcgaagaagtgctg
cgcaacaagaagatcgcccccatgctgggcgcccgcatcgacgacgacacgatcatcgtg
cacgccagcgagcggggccacatcaagcagatgctgctcaagatcggttggcccgccgag
gatctcgccggttacgtcgacggcgaggcgcaccccatctccctcgcgcaggacggctgg
gagctgcgcgactatcaggagatggccgccgactccttctgggcgggtgggtccggcgtg
gtcgtgctgccctgcggcgcgggcaagacgatcgtcggcgccgccgccatggccaaggcc
ggcgcgacgacgctgatcctggtcaccaacaccgtggcgggcaggcagtggaagcgggag
ttgatcgcgcgcacgtcgctcaccgaggacgagatcggcgagtactccggcgagcgcaag
gaggttcgcccggtcaccatcgcgacttaccaggtgatcacccgccggaccaagggcgag
tacaagcatctggagctgttcgacagccgcgactgggggctcatcatctacgacgaggtg
cacctgttgcccgcccccgtctttcgcatgacggcggacctgcagtcgcggcgccgactc
ggcctgaccgccacgctgatccgcgaggacgggcgcgagggtgacgtgttcagcctcatc
gggccgaagcgctacgacgcgccgtggaaggacatcgaggcgcaggggtggatcgcgccc
gcggagtgcatcgaggtccgcgtcacgatgaccgagaacgagcggatgctctacgcgacg
gccgaaccggaggagcgctacaagctgtgctccacggcgcacaccaaggtcgcggtcgtg
aagtcgatcctggaccgccatcccggcgaacccaccctggtgattggcgcctacctcgat
cagctcgacgaattgggccgcgaactcgacgccccggtgatccaggggtcgaccaagacc
gccgagcgcgagacgctgttccaggcgttccgcaccggcgagatccgcacgctggtggtg
tccaaggtcgccaacttctccatcgatctcccggaagccagtgtggccgttcaggtttcg
ggcaccttcgggtcccgtcaggaagaggcccagcggctgggccgactgctgcgccccaag
gccgacggtggcggtgcgatcttctactcggtggtgtcgcgcgacagcctcgacgccgag
tacgccgcccaccggcagcgcttcctcgccgagcaggggtacggctacgtcatcaaggac
gccgacgatctgctcggcccggccgtatga
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