Mycolicibacterium madagascariense: MMAD_47940
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Entry
MMAD_47940 CDS
T06841
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmag
Mycolicibacterium madagascariense
Pathway
mmag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAD_47940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmag03019
]
MMAD_47940
03400 DNA repair and recombination proteins [BR:
mmag03400
]
MMAD_47940
Enzymes [BR:
mmag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMAD_47940
Messenger RNA biogenesis [BR:
mmag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMAD_47940
DNA repair and recombination proteins [BR:
mmag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMAD_47940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
Pribosyl_synth
Motif
Other DBs
NCBI-ProteinID:
BBZ30499
UniProt:
A0A7I7XMM8
LinkDB
All DBs
Position
complement(5021006..5023132)
Genome browser
AA seq
708 aa
AA seq
DB search
MSDDPHPFPSLRAPVIRADAQTILEQLAGPHAVLRDDQWVAIEALVVQRRRALVVQRTGW
GKSAVYFIAAKLLRAAGFGPTVIVSPLLALMRNQVAAADRAGVHAATINSSNVADWSEIH
DRVRGGELDVLLVSPERLNNPDFRDQVLPALAQDAGLVVVDEAHCVSDWGHDFRPDYRRI
RTLLADLGSDVPVLATTATANDRVVEDVASQLGVGGKDTLVLRGGLDRESLRLSVVTAGN
PAQRAAWLAAHLDSLPGSGIVYTLTVAQANDVATLLRDRGHAVAAYTGATETSEREQLEG
DLLANRVKALIATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRSTDSAEVVLLP
GREDQDVWRYFSSVAFPSEAMVRNVIGALERDRPQSTPALEPLVDLGRTRLEMVLKVLDV
DGAVRRVKGGWVATGEPWEYDEARYRKLDEARRREQQAMLDYQATDGCRMAFLRRQLDDP
ELGADERCGRCDNCTGNRYDAAVDPSSAEETRQRLMRPGVEISPRKQWPSGLAKLGVQLS
GKIGDGPAPGRVIGRLTDLGWGARLRALLDAPDAPASEDVVKAAVAVLASWGWTTRPTAV
LAMDSDRHPLLISSLASELARLGRLTDLGVLRYAPERRPVTAANSAYRVAALQDSWQPPD
ASVIGAAGGPVLLVDDMTDTGWTLTMAARVVRAAGAPDVLPFALASTS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgatgacccccacccgttcccgtcgctgcgcgcgcccgtgatccgcgcggacgcg
cagaccatcctcgaacagctcgccggaccgcacgccgtcctgcgcgacgaccagtgggtc
gcgatcgaggcgctcgtcgtccagcgccgtcgcgcgctcgtcgtgcagcgtaccggctgg
ggcaagtcggcggtgtacttcatcgccgccaagctgctgcgggccgcgggcttcgggccg
acggtcatcgtctcgccgctgctggcgctcatgcgcaaccaggtggccgccgccgaccgg
gccggcgtccatgccgcgaccatcaactcgagcaacgtcgccgactggagtgagatccac
gaccgcgtccgcggcggcgagctcgacgtgctgctggtcagcccggaacgcttgaacaat
ccggactttcgcgatcaggtactgcccgcgctggcgcaggacgccggactcgtcgtcgtc
gacgaggcgcactgcgtgtcggactgggggcacgacttccggcccgactaccgccggatc
cgcacgctgctggccgatctcggttccgacgtcccggtgctggccaccactgcgaccgcc
aacgaccgcgtggtggaggacgtggccagccagctcggcgtcggcgggaaggacacgctg
gtcctgcgcggagggctcgaccgcgaatcgctacggctgtcggtggtcacggcgggcaac
cctgctcagcgtgcggcttggcttgccgcacacctggattcgctacctggctcgggcatc
gtctacacgctgacggtggcgcaggcgaacgacgtcgccacgctgctgcgggatcggggg
cacgcggtcgcggcctataccggcgccaccgagaccagcgagcgcgagcagctggagggc
gatctactggccaatcgcgtcaaggcgctcatcgccacgtcggcgctcggcatgggcttc
gacaaacccgacctcggcttcgtcgtccatctcggcgcaccgtcgtcgcccatcgcgtac
taccagcaggtcggccgggccgggcgctcgaccgacagcgccgaggtggtgctgctgccc
ggtcgcgaggaccaggacgtgtggcgctacttctcgtcggtggcatttccctcggaagcc
atggtgcgcaacgtgatcggcgctctcgagcgcgaccgtccgcagtcgacgcccgcgctg
gagccgctggtggacctgggccggacgcggctggagatggtcctcaaggtgctcgacgtc
gacggcgcggtccgtcgcgtcaagggcggctgggtggcgaccggcgagccgtgggagtac
gacgaggcgcgctaccgcaagctcgacgaggcgcgccggcgcgagcagcaggccatgctc
gactaccaggcgaccgacggttgccggatggcgttcctgcggcgccagctcgacgatcca
gaactcggggccgacgaacgctgcgggcgttgcgacaactgcaccggcaaccgctacgac
gccgcggtcgatccgtcgtcggccgaggagacccggcagcggctgatgcgccccggcgtc
gagatcagcccgcgcaagcagtggccgtccggcctggccaagctcggcgtgcagctcagc
gggaagatcggcgacggtcccgccccgggtcgagtgatcgggcggctcaccgacctcggc
tggggtgcgcggttgcgcgccctgctcgacgcgcccgatgcgccggcgagcgaggacgtc
gtcaaggccgcggtcgcggtgctggcgtcctgggggtggacgacgcggcccaccgccgtg
ctcgcgatggactccgaccggcacccgctgctgatctcctcactggcctccgaactcgcc
aggctgggcaggctcaccgacctcggggtcctgcggtacgcaccggaacgccgtccggtg
acggccgccaactcggcgtatcgcgttgcggcgctgcaggattcgtggcagccgcccgat
gcgtcggtcatcggcgccgcgggcgggccggtgctcctcgtcgacgacatgaccgacacc
gggtggacgctgacgatggcggcgcgcgtggtgcgtgccgccggcgcgcccgacgtgctg
ccgttcgcgctcgcgagcaccagttag
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