Candidatus Mycoplasma mahonii: O3I44_00425
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Entry
O3I44_00425 CDS
T09640
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mmah
Candidatus Mycoplasma mahonii
Pathway
mmah03030
DNA replication
mmah03430
Mismatch repair
mmah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O3I44_00425
03430 Mismatch repair
O3I44_00425
03440 Homologous recombination
O3I44_00425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmah03032
]
O3I44_00425
03400 DNA repair and recombination proteins [BR:
mmah03400
]
O3I44_00425
Enzymes [BR:
mmah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O3I44_00425
DNA replication proteins [BR:
mmah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O3I44_00425
DNA repair and recombination proteins [BR:
mmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O3I44_00425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
RNase_H_2
HHH_6
HHH_3
tRNA_anti-codon
Zn_ribbon_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WKX02533
LinkDB
All DBs
Position
87090..91367
Genome browser
AA seq
1425 aa
AA seq
DB search
MNNAFEKLAKEIDFTVTQHFENIKVTEAKLEKNNIFNIEFFVNEIIPFYEMELFLIKLRD
NFQYKTKFQFNVLSIIYNEAEVNRYLDWIVSSYMNKKYISKIIMASKKEFSELGCTIFLK
SKYSVNQIQEIKDKIEKIMSKMGFNNFKMTLEYDKANEGLLQEEFSKNLENAKNAISATT
NESDEDATLTRKRAYQKFAISELPTSQANLVMIEGQIFNIDTKKTKTSWVITTFSITDFH
DAIYVKVFSKNQKEVDQLDKYNVGSFVTINGKYELDAFLKEPIITANKISLIKSFKEIRT
DKAKHKRIELNCKTRMSAMDGISSATELVKKAEEWGHEAIAIVDKDGIQSFTDFYNATKK
SKVKPIYGATFDVISRNNKSIYNHSDKTLERTDYIVFDIETTGLSPIFDEIIEFGAVKIS
SGEIIEKKQFFIKPSKPISQFTKNLTGITDDHLQNAVSQEEGVQLIRDYILGYTTVAHNA
NFDITFINEKLHKYNIEIITDPVIDSMIVARIVEPDKKRFNLGAVAKRQGVDYDSSVAHR
GDYDADILARIWLKFLNQLSNLNLKTQKELFDFIDKSLYEKTFSNDMVIIAKNQIGLKKL
FKLTSLALVDNYANGAKLFIDDLKDRGDFLIGSGGLNSRLLDRMFYGSKEQIIKEISFYD
YIEIQPLQNFKHFINRGVDVEDIKFIIKFIVDESIKQEKIVVATCDSRYINPEDNLYHRV
YISAKGLGGVRHPLFKFNEENPVYPDQHILTTEEMIHAFDFLGDIKLIEEVVITNTKKIA
DQVEKIQVIKEKLYTPKFGDSNMDLTDLVYRNAKKIYGAELPKLVENRIKKELEPIISYG
FAVIYWISHLLVKKSLDDGYLVGSRGSVGSSLVATLAEITEVNPLEPHYICGGCQYFEVS
NDLSLNSGFDLPEKKCPNCDANLMRDGQNIPFETFLGFNADKVPDIDLNFSGDYQPIIHQ
EVKKLFGDKHAFRAGTISTVAERTAFGYVKGWAEQTGKKLSRPFTEYLAKGVAGTKRTSG
QHPGGIIVIPSEFDVEDFTPINYPANDVESAWKTTHFDFYSIHDNVLKLDLLGHDDPTAL
KLLEKFTGIQAKNIPMNDPKIISLFSSPEELGIRPRDILAESTGALGIPEFGTNFVRGML
KTTNVTSFGDLVSVSGLSHGTDVWATNAELLVRNDGKTLTEVISCRDDIMIDLINKGVDP
LISFKIMENVRKGQGLNEDWTTSMKEHGVEDWYIDSLLKIKYMFPKAHAVAYVTMAWRVA
WFKLYYPIPYYATYFTTRADVFDIKTVISGKTQIEAAIKDFKSRKYKSGDLKLSNKEIAL
IPVLEIANEALARGVKIGNISMKDSLANEWVIMNDTLIPPFSAIDGLGDSVAKSIIAART
DKAFVSKEDIKKRTSVNNTTLNKFEELGITSEYSDSNQMSLDFGF
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgcatttgaaaagttagcaaaagagattgattttactgtcacacaacatttt
gaaaatattaaagtaactgaggctaaattagaaaaaaacaatatattcaatattgagttt
tttgttaacgaaatcatcccattttatgaaatggagcttttccttattaaactaagagac
aattttcaatataaaactaagtttcaattcaatgtgctatctattatatataatgaggca
gaagttaaccgatatttagattgaattgtatctagttacatgaataaaaaatatatttca
aaaataattatggcctcaaaaaaggaattttcagaattaggatgcacaatatttctaaaa
tcaaaatattctgttaaccagattcaagaaattaaagataaaattgaaaaaataatgagc
aaaatgggctttaataatttcaagatgactttggaatacgacaaggctaatgaaggcctt
ctccaagaggaatttagtaagaatctagagaatgctaaaaacgcaatatctgcaaccact
aacgaatccgatgaagatgcgaccctaactcgtaaaagagcatatcaaaaatttgccata
agtgaattacctacatctcaagcaaatctagttatgattgaaggccaaatatttaatatt
gacacaaaaaaaaccaaaacaagttgagtaataaccacattttctataactgattttcat
gatgcgatatatgtgaaagttttttcaaagaatcaaaaagaagttgatcaacttgataaa
tataatgttggctcttttgtgactattaatggtaaatacgaattagatgcatttctgaag
gaacccattattaccgctaataaaatttcattaattaaatcattcaaggaaataagaact
gataaagcaaaacacaagagaattgagctaaattgtaaaaccagaatgagtgctatggac
ggaatatcttccgcaactgaattagttaaaaaggcagaagagtgaggtcatgaagctatt
gcgattgttgataaagatggtatacaatcttttactgacttttataatgccactaaaaaa
tccaaagtaaaaccaatctatggggccacatttgatgtaataagcagaaataataagtct
atctataaccatagcgataaaacacttgaaagaaccgattatattgtttttgatattgag
acaactggcctctcacctatttttgatgaaatcatagaatttggcgcagtcaaaatatct
agtggcgaaataatagaaaaaaaacaattctttattaaacctagtaaaccaatttcacaa
tttacaaaaaatctaacagggattactgatgatcatcttcaaaacgctgtatcacaagaa
gagggtgttcagcttattcgcgattatatccttggttatacaactgttgctcataatgca
aattttgatattacatttattaatgaaaaactccataaatataatattgaaataattaca
gatcccgttattgattctatgattgtagctagaattgtggaaccagataaaaagcgtttc
aacttgggtgctgttgccaaaaggcagggcgttgattatgattcatctgttgcccataga
ggagattatgatgctgatattcttgctagaatatggttgaaatttttaaatcaattatca
aatttaaaccttaaaacacaaaaggaattatttgattttattgataagtcactttatgaa
aaaacattttcaaatgatatggttattattgccaaaaatcaaattggtcttaagaaatta
tttaaattaacatcacttgcattagttgacaactatgctaatggtgccaaattatttatt
gatgatttaaaagatagaggagactttttgattggatcaggaggattgaattcaagactt
ttagatagaatgttttatggttcaaaagagcagattattaaagaaatatcattttatgac
tacatagaaattcaacctttacaaaactttaagcactttataaacaggggtgtggatgtt
gaggatattaagttcataattaaatttattgttgatgaatctattaagcaagaaaaaatt
gtggtagccacatgtgattctcgatatataaaccctgaagataatctctaccatcgcgtt
tatatatctgccaaaggattagggggagtcagacatccgttattcaaattcaatgaggaa
aatccagtttatccagatcaacatatcctcacaacagaagagatgatacacgcttttgat
tttttaggagacattaaattaattgaagaagtggttattactaacacaaaaaaaatagca
gatcaagttgaaaaaattcaagtaataaaagaaaaactatatacgccaaaatttggtgat
tcaaacatggatttaactgatctagtttatagaaacgcaaagaaaatttatggagcagaa
ttaccgaagttagttgaaaatagaatcaaaaaagaattagaaccaatcataagttatggg
tttgctgttatctattggatttctcacttattagtgaagaaatctcttgatgatggttat
ttagttggctctcgtggttctgttggctcatcacttgttgcaactcttgccgaaataaca
gaagttaaccctttagaacctcattacatttgtggtggttgtcaatattttgaagtttca
aatgatttaagtttaaactcaggatttgatttaccagaaaaaaaatgtcctaattgtgat
gctaatttaatgagagatggtcaaaacattccatttgaaacatttttaggatttaatgct
gataaagttcctgatattgatctaaacttctctggtgattatcaaccgattattcatcaa
gaagttaaaaaattattcggagataaacatgcttttagagctggaaccatttccactgtt
gctgaaagaacagcctttggatatgtaaagggttgagcggagcaaacaggtaaaaagttg
tcacgccctttcactgaatatttagcaaaaggagttgccgggacaaaaagaacttctgga
cagcaccctggaggtattattgttatcccctctgaatttgatgtcgaggattttacacca
attaattacccagctaatgatgttgaatctgcatgaaaaacaactcactttgatttttat
tcaattcatgataatgtgcttaaattagatttacttggacatgatgatcccaccgcttta
aaattactagaaaaatttacagggattcaggctaaaaatataccaatgaatgacccgaaa
attatttcgttgttttcttctcctgaagaattaggaattagaccaagagatattctcgct
gaatctactggcgcgttaggtattcctgaatttggtactaattttgtaagaggcatgtta
aaaacgacgaatgttacatcatttggagatttagtttctgtttctggtctttcacacgga
acggatgtatgagcaactaatgccgagttattggtgagaaatgatgggaaaacattgaca
gaagttatttcttgtcgtgatgatattatgatcgatctaattaataaaggtgttgatcct
ttaatatcatttaaaattatggaaaatgttcgtaaaggacagggattaaatgaagattga
actacatccatgaaagaacatggcgttgaagattggtatattgactcactattaaaaata
aaatatatgtttcctaaagcccatgcagttgcttatgtaaccatggcttgaagagtggca
tgattcaaactttattatcctatcccttactatgccacatatttcacaacaagagcagat
gtttttgatattaaaacagtaatttctggtaaaacacaaatagaagctgctattaaggat
tttaaatcaaggaaatacaaaagcggtgatttaaaactttccaataaagaaattgcgtta
atccctgttctagaaattgccaacgaagcccttgctagaggtgttaaaattggaaatata
tcgatgaaggattcacttgcaaatgaatgggtcatcatgaatgatactttaatcccgcca
ttttctgcaattgatggtcttggcgattctgtggctaaatcaattattgcagctagaacc
gataaggcatttgtttctaaagaagatattaaaaaaaggacatctgtgaataacacaaca
ctaaataaattcgaagaattaggtatcaccagtgaatattctgattcgaaccaaatgtca
ttagattttggattttaa
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