Candidatus Mycoplasma mahonii: O3I44_03060
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Entry
O3I44_03060 CDS
T09640
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mmah
Candidatus Mycoplasma mahonii
Pathway
mmah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O3I44_03060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmah03021
]
O3I44_03060
03400 DNA repair and recombination proteins [BR:
mmah03400
]
O3I44_03060
Enzymes [BR:
mmah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O3I44_03060
Transcription machinery [BR:
mmah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O3I44_03060
DNA repair and recombination proteins [BR:
mmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O3I44_03060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WKX02355
LinkDB
All DBs
Position
complement(654811..658338)
Genome browser
AA seq
1175 aa
AA seq
DB search
MAITKEYKLKTFGPTTKRRDYSETAHDLPITDLLTIQKDSYKWFLNHGLAKTFKNIYPIE
SFNGRIRLEFLPKSLRLEKPKNEFDAVKLAKQKGMTYNVKVMGKVQKIDEETAEAKTQEV
LFGEIPLMTSGGTFLINGSEKIIITQLLRSPGAYYGVNTKNSISNIRGALYNRLELIPKL
GSWLDISHRVTGSTADYVRMSIDKKKSVSISTFLRALGMSKDGIVETFGDVPIITESILK
DKDVTEEDCLEKMHRIIRKGDRITADSKKNLFPNIFFNPRRYDLSQTGRYMLNRKLNLVE
RITDTILAADIKIADKVLYKAGTVINFELAKEIQKQFNKKVLKPINAKGITKEVYGSYLE
DNPKLASRVKVISILVNKNLADFENKVKPIIVLGNLSASDENHLLISDIVAAVSYYFNLA
EGLGLDDDPDSLINKRVVAVGELLQNQFQIGLTKLERNAKERMSSKEPEKITPKNITNNK
AIFNQFKTFFNSSQLSQFMDQMNPLAEIANKRRVTSLGPGGLNKDTAFINVRDVHSTHYG
RICPIESPEGPSIGLILNFSNYARINELGFVETPYFKVIDNVVQSKPIFMTAFQEKGLTF
AQSTININEKRVLTDKVITVRKDSDYIVVSPKEVDYVSVSSKQMTSISSSCIPFLESDDA
VRALMGSNMQRQAIPLLKSEAPYVATGVEKDIAKFSASNIRAERDGEVVYADSTIIKIKH
GSKNKTYKLRAFERSNQGSVISQRPIVIVGDKVKEGQIITDGPSFDKGELALGKNVTVAF
TTWNGYNYEDAIIMSEKLMKDDVFTSLHIDEKTIQFRKAKIGDDELTAEVPNTSNFSRRN
LDENGIVRIGSEAVAGDVLVGRVSPKGEDNPTPEEKLIAAIFAKKFSNQKDTSLKVKHGH
GGTVIDVEVLSRDKGDKLKDAIEMVVKIYIAKKRKIKPGDKMAGRHGNKGVISRILPIED
MPHLADGTPVDIMLNPQGVPSRMNIGQILELHLGMAAKKLNVKFISPVFDGIKYNTITDI
LKEADLPENGKFDLYDPTSGEKFDHKISVGSMYMIKLAHMIDDKMHARSVGPYSLITQQP
LGGKSQNGGQRFGEMETWAVESYGATNVLQELLTYKSDNIEGRNKIYNALANGAPLPKPG
MPESFNVLAYELRGLGLKIELDIEENSHWEEENAI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggctattactaaagaatacaaactaaaaacatttggacccaccacaaagagaagggat
tattctgagactgcacatgatttacctattactgatttattaacaatccaaaaagattca
tataaatgatttttgaatcatggtctagcaaaaacatttaaaaatatatatccaattgaa
tctttcaatggaagaataagattagagtttttacccaagtcattaagacttgaaaaacca
aagaatgaatttgatgcagttaaacttgcaaaacaaaaaggcatgacttacaatgtcaaa
gtcatgggtaaagttcaaaaaattgatgaagaaacagctgaagctaagacccaagaagtc
ctatttggagaaattccacttatgacaagcggaggaactttcttgattaatggttctgaa
aagataatcattacacaattattaagatcaccaggtgcttattatggagttaacactaaa
aactctatttcaaatatccgtggtgctctttacaatagattggaactaataccgaaatta
ggatcatgacttgacatatctcacagagttactggttctacagcagactatgtaaggatg
tcaattgataaaaagaaatcggtttctatttccacttttctaagagcattaggaatgtcg
aaggatgggattgtcgaaacttttggtgatgtgccaattattactgagtcaattcttaag
gacaaagatgtaactgaagaagattgtctagaaaaaatgcacagaattatcagaaaaggc
gatagaatcacagctgattctaagaagaatcttttcccaaatattttctttaatccaaga
agatatgatttatcccaaactggtagatacatgcttaatagaaaacttaatttggttgaa
agaatcactgacacaattttagctgctgatattaaaatagccgataaagttttatataaa
gccggaacagtaatcaattttgaacttgctaaagaaattcaaaaacaattcaacaagaaa
gtccttaagccaataaacgcaaaaggtattactaaagaagtttatggatcatatctagaa
gataaccccaaactggcaagcagagttaaggttatttctattttagttaataagaatctt
gcggattttgaaaataaagtaaaacccattattgttttggggaacttgtctgcatctgat
gaaaatcatttattaatatctgatattgttgctgctgtttcatattactttaatcttgca
gagggcttaggattggatgatgatccagattcacttattaataaaagagttgtggctgtc
ggagaattattgcaaaaccaattccaaattggcttaactaagttagaaagaaatgctaaa
gaaagaatgtcatcaaaggaaccagaaaagattactccaaaaaacattactaacaacaaa
gcgattttcaatcagtttaagacattctttaactcctcacaactttcacaatttatggat
caaatgaatcctcttgcagaaattgctaacaaacgtcgggtaacatcattaggtcctggt
gggcttaataaagatacagcatttattaatgttcgtgatgttcatagtactcactatggg
cgtatttgtccaattgaatcacccgaggggccgagtattggattgattcttaacttttct
aactatgccagaattaatgaactagggtttgttgaaactccatattttaaggtaattgat
aatgttgttcaatcaaaaccaatctttatgacggccttccaagaaaaaggattgactttt
gcgcaatcaacaattaatattaatgagaaaagagtcctaactgataaagtcataactgtt
agaaaagattctgattatattgttgtctcaccaaaagaagttgattatgtatctgtctca
tctaaacaaatgacttcaatttcttcttcgtgcattcctttcttagaaagtgatgatgct
gttcgtgccctaatgggttcaaatatgcaacgtcaagcaattcctttattaaaatcagag
gcaccatatgtggctactggggttgaaaaagatattgctaagttttctgcatctaatatt
cgcgctgaaagagatggcgaagttgtttatgctgattcaactattatcaaaattaagcac
ggatctaaaaataaaacttataaattaagagcttttgaaagatctaatcaaggttcagtt
attagtcaaagaccaattgttattgttggagataaagttaaagaaggtcaaataattact
gatggtccttcatttgataaaggtgaattagcacttggtaaaaatgtcacagttgctttc
accacttgaaatggttataactacgaagatgctattatcatgtctgaaaaattaatgaaa
gatgatgtttttacatctttacacattgatgaaaaaacaattcaatttagaaaagctaaa
attggtgatgatgagttaactgctgaagttcctaatacatccaacttctcaagaagaaat
cttgatgaaaatggaatcgttagaatcggttcagaagcagtggctggagatgtacttgtc
ggacgtgtttctcctaaaggtgaagataatcccactcctgaagaaaaattgattgccgcc
atatttgctaagaaatttagtaatcaaaaagatacttctttaaaagttaaacacgggcat
ggaggaactgttattgatgttgaagttctttctagagacaaaggcgataaattaaaagat
gccattgaaatggttgttaaaatttatattgctaagaaaagaaaaattaaacctggggat
aagatggctggacgtcatggtaataaaggtgttatttcaagaattttgcctattgaagat
atgcctcacttagcagatggtacaccagttgacattatgcttaacccccaaggtgttcct
tcacggatgaacattggtcaaatattggaattacatttaggaatggcagccaagaaattg
aatgttaaatttatttcgccggtttttgatggaattaaatacaatacaattactgatatt
ctaaaggaagctgatttaccagaaaatggtaaatttgatctttatgatccaacgtcaggt
gaaaaatttgatcacaagatttctgttggttccatgtacatgattaagcttgctcatatg
attgatgataaaatgcatgctcgttcagtcggaccatattcacttattacgcaacaacca
cttggaggtaagtctcaaaatggaggtcaaaggtttggtgaaatggaaacatgagccgtt
gaatcttatggtgctacaaatgtgcttcaagaattacttacttataaatcggataatatc
gaaggtcgtaataaaatttataatgccctagcaaatggtgccccattacctaaaccaggt
atgcctgaatcatttaatgttcttgcctatgaattaagaggcttgggattaaaaattgag
ttagatattgaagaaaattcacactgagaggaagaaaatgccatttaa
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integrated database retrieval system
