Candidatus Mycoplasma mahonii: O3I44_03505
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Entry
O3I44_03505 CDS
T09640
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmah
Candidatus Mycoplasma mahonii
Pathway
mmah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O3I44_03505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmah03019
]
O3I44_03505
03009 Ribosome biogenesis [BR:
mmah03009
]
O3I44_03505
Enzymes [BR:
mmah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O3I44_03505
Messenger RNA biogenesis [BR:
mmah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O3I44_03505
Ribosome biogenesis [BR:
mmah03009
]
Prokaryotic type
rRNA helicases
O3I44_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Flavi_DEAD
AAA_30
HEM4
Motif
Other DBs
NCBI-ProteinID:
WKX02432
LinkDB
All DBs
Position
764271..765773
Genome browser
AA seq
500 aa
AA seq
DB search
MKFKELNLSKELLDTLELIGYREASPIQEKAIPVAMSGNDIIGQAQTGTGKTAAFGIPLI
ENTIKNRNLQHIILAPSRELATQIYNELHKLSANKDIKVIDIIGGISYTIQKRSLSSGPN
IIVATPGRFIDNLDKGLIDLSHVTTFTLDEADEMLNFGFYKEITRIKKSLPDKIQTLFFT
ATFNPKIKKLATEILNNPVSIIISEGLSSTQTVLQKHIIVTERQKISTLVALLQMLKPKS
AIIFGRTKRRVEELTAALKKMNFDVVGIQGDMRQRERSFAMDGFRRGKVSIIVGTDVIAR
GIDVDGIDYVFNFDLPDELEYFTHRIGRTGRAGSKGTSISFIKETERSYFKQIMNTTGST
SEQWPIPSGKDLAEVKEKQLEDSMKVLLEMGKNKFTETGKMISESFTKEELGIILSEALI
GSKDVSQSITLTQEVSNAQRRGVKGGRSSGGRNRGGGKRSSYGSQGGNRRGYGGGKNNSY
SSNRSSTSRANLSRPRSPKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaagaattaaatttatccaaagaactgctcgatacactcgaactaattgga
tatagagaagcatcaccaattcaagaaaaggcgatccctgttgctatgtctggtaatgat
attattggtcaagcacaaacaggaacaggaaaaactgcggcatttggtattcccttaatt
gaaaatacaattaaaaataggaatttgcaacatattattcttgcaccttcaagagaatta
gcaactcaaatatataatgagttgcacaagctatcagctaataaagatattaaggtgatc
gacattattggtggtatttcctacaccattcaaaaaagatcattaagtagtggacctaat
attattgttgcaacaccaggaagattcatcgataaccttgataaaggcttaattgatctt
tcacatgtaactacatttacacttgatgaagcagatgaaatgttgaattttggtttctat
aaagaaatcaccagaattaaaaaatcattgcctgataaaattcaaacactattttttact
gcaacatttaatccaaaaattaaaaaattggcgactgaaattttaaataacccagtatcc
attattatttcagaaggactatcctcaactcaaacagttttgcaaaaacatattatagtg
actgaaaggcaaaaaatttcaacattagtggcattattgcaaatgttaaaacctaagtcc
gcgattatttttgggagaacaaaaagaagggttgaagaattaacagcagcacttaaaaaa
atgaattttgatgtagtaggaatccaaggtgatatgagacaaagagaaagatcctttgct
atggatggtttcagaagaggtaaagtaagcataatcgtcggaactgacgtaattgctagg
ggaattgatgttgatgggattgattatgtcttcaactttgatttaccagatgaacttgaa
tactttactcatagaattgggagaacaggaagagccggaagcaaaggaacatcaatttcc
tttatcaaggaaactgaaagatcatactttaagcagattatgaacacaactggttcaaca
tcagaacaatgaccaataccgtctgggaaagatttggcagaggttaaagagaaacaactt
gaggattctatgaaagttcttttggagatgggcaaaaataaattcactgaaactggaaaa
atgatttctgagtcatttaccaaagaggaacttgggattattcttagtgaagcccttatt
ggttcaaaggatgtttctcaaagtataacattaacacaagaagtgagtaatgcacaaaga
agaggggtaaaaggcggaaggtcttccggaggaagaaatagaggcggtggaaaacgttca
tcatatggttctcaaggtggaaacagaagaggttatggcggtggaaagaacaattcatat
tcttcaaatagatcaagcacaagcagggccaatttaagtagaccaagaagtccaaaaaaa
tag
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