Methylocaldum marinum: sS8_0178
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Entry
sS8_0178 CDS
T05638
Name
(GenBank) sigma factor regulatory protein, FecR/PupR family
KO
K07165
transmembrane sensor
Organism
mmai
Methylocaldum marinum
Pathway
mmai02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
sS8_0178
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Gene cluster
GFIT
Motif
Pfam:
FecR
DUF4880
Motif
Other DBs
NCBI-ProteinID:
BBA32146
UniProt:
A0A286P3C4
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Position
complement(174039..175100)
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AA seq
353 aa
AA seq
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MSPSSRDSSPDLTEQAIEWFVLLHSEEAGADQHGQFAAWLARSPAHGEAYAAVEKLYGDM
RQVAQAAQMHRAESISKPVQTARATRHPLGAATPEFSGKTAPRKTLWNRYGSRLLQTGLA
AAAVWLFAILLILPEQFHLSDAWLSDHYTRTGEQREIRLADGSQVLLNTNSAVTVDYGPR
LRQVRLLHGQARFEVAADAARPFEVISDDLKARALGTVFEVYRKETGEISVTVQEHAVSV
TAGDGAAAVVEQGQRILYRPGHGLEAPEAVNLKLAAGWQQRRIMISDRPLGELLAEVDRY
RLGRVFITDPELAKLPVTGVFSLDDPDAILVSVSKALALRSTQLGPWWIALHR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagctcccgggattcatcaccagacctcaccgagcaagccatcgaatggttc
gtgctgcttcattccgaggaagccggcgcggaccagcacgggcaattcgccgcctggctg
gcacgaagcccggctcatggcgaggcttacgccgctgtggaaaaactctacggcgatatg
cgtcaggtagcgcaagccgctcaaatgcaccgcgccgaatcgatttccaaaccggtacaa
acggcacgcgcgactcgacaccccttgggcgcggcaacgccggagttttccggcaaaacc
gcccctaggaagacgctatggaaccgttacggctcccgtttgctgcaaaccggtctggca
gcggccgccgtatggctgttcgcgatactgctgattctgccggaacaatttcatttatcg
gatgcctggctgagcgaccattacacccgcaccggcgagcagcgggaaattcgcctcgcc
gacggcagccaggtcttgctcaacaccaacagcgccgtgaccgtggattacgggccgaga
ttgcggcaggtcaggctgctgcacggccaggcgcgcttcgaagtcgccgccgatgccgcg
aggcccttcgaagtgatttcggacgatctcaaggcgcgcgccctcggcacggtgttcgag
gtctatcgcaaggaaaccggcgagatcagcgtgacggtgcaggaacatgccgtgtccgtg
accgccggagacggcgcagcggcagtggtcgagcagggccagcggatactgtataggccg
ggccatggtctggaagcaccggaagccgtgaatttgaaactcgccgccggttggcaacag
cggcgcatcatgatcagcgaccgcccgctgggcgaactgctcgccgaggtggaccgctac
cgcctcggccgggtcttcatcaccgatccggaactcgcgaaactcccggtcaccggcgtg
ttttccctcgatgatcccgatgccattctcgtgtcggtcagcaaggccctggctctccgt
tccacccaactcggcccctggtggatagccctgcaccgctaa
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