Methylocaldum marinum: sS8_0749
Help
Entry
sS8_0749 CDS
T05638
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai00061
Fatty acid biosynthesis
mmai00071
Fatty acid degradation
mmai01100
Metabolic pathways
mmai01212
Fatty acid metabolism
mmai02024
Quorum sensing
mmai04146
Peroxisome
Module
mmai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
sS8_0749
00071 Fatty acid degradation
sS8_0749
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
sS8_0749
09145 Cellular community - prokaryotes
02024 Quorum sensing
sS8_0749
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mmai01004
]
sS8_0749
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmai04147
]
sS8_0749
Enzymes [BR:
mmai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
sS8_0749
Lipid biosynthesis proteins [BR:
mmai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
sS8_0749
Exosome [BR:
mmai04147
]
Exosomal proteins
Exosomal proteins of breast milk
sS8_0749
Exosomal proteins of breast cancer cells
sS8_0749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
AMP-binding_C_3
PP-binding
AMP-binding_C
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
BBA32714
UniProt:
A0A250KMD9
LinkDB
All DBs
Position
820905..823580
Genome browser
AA seq
891 aa
AA seq
DB search
METLQDLIRQLGGHGGKPALTAFFKKRVETWSFGRLAGYAHRLAPGLGAQDLRPGDTVGL
FAPNSPEWVAACLGSIEAGMVPVLIDAQMGDEDLRHVVADSGMRWVFTTRRGLQRLERLN
PEHNLRPILLDADPDDARDWRRYCSAAESTAARAVADDIAVLFYTSGTTGAPKGVPLSHR
NLVANLQAILDLEVVRARERFLLPLPLHHVYAFTIGLLTPLAAGVPVIFPQSLTGPELLR
ALKEGKATFLAGVPRMYESLFEGIETRVRQRGRLAECLFHHGLNLAVALRRHSEIAIGRS
VFAPLHREFAPDLRMLLCGGAMLAPDLAFRLTGLGFDLATGYGLTETSPVLTFNVPGRAR
FDTAGAPLPGVEIRIAEPEPPAEYGEVLAKGPNVFAGYRNLPDKTREAFTANGFFRTGDL
GYLEDGYLHLVGRSSEMIVLPGGENIRPEYVEEALSRGSYIKEAAVLEQKGRLAVLIVPA
PAATREGGDVEALIRKDIESQSRRLPSHHRIGDFAITPDPLPRTHLGKLRRFELDEIFRT
AKRKGEAAAGETGPLPFERMAPEDRQLLEEPNALRIWNWLAERFPDVRLMPDTNLQIDLG
VDSLEWLSLGLEMGADTGVELDEEAMGRVQTVRDLVREGAETSGGAEGVPKDPLVRLSRP
DALLDPDQRRWIEPPGTWSSALGILLFGFDRWLMERAFGVNAEGLDELPVNQPFILVPNH
VSYLDPMAIAAVLPREQLLRTCWAGFTGVMFKNALMRQVSRSTGTFPVDPRRGALASLAL
GVLALRRGNNLVWFAESSRSASGELQPFESGIGLLLRAVSVPAVPLWIGGSYTALPVGSW
VPRFRPIELRFGSPATAEELEQEGQGEHPDQRIAAALRDRVARLGSRARAI
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctacaggacctgattcgacagctcggcggacatggcgggaagcccgcgctc
acggcatttttcaaaaaacgcgtcgaaacctggagcttcgggaggcttgccggctacgcg
caccgcctggcgccgggactcggcgcacaggatctgcgtccgggagataccgtggggctc
ttcgcgcccaatagcccggaatgggtggccgcttgtctcggctcgatcgaggcaggcatg
gttcccgtcctgatcgatgctcagatgggcgacgaggatctccggcacgtggtggcggat
agcggaatgcgttgggtgtttacgacgcggcgcgggcttcagcgtttggagcgtttgaat
ccggagcacaatctccggccgattctgctggatgcggacccggatgacgcccgggattgg
cggcgttactgctctgctgcggaaagtacggccgctcgggcggtagcggatgatatcgcc
gttctgttctacacctccggcacgaccggcgctcccaaaggggtgccgctgagccaccga
aatctcgtagccaatctccaagccatactcgatctcgaggtcgtccgagcgcgggaacgc
tttctgttgccgctgccgctgcaccatgtctacgccttcaccataggcttgctcacgcct
ttggccgcgggcgttcccgtcatttttccccagtcgctcaccggtcccgagctgttgcgt
gcgctgaaggaaggcaaggccaccttcctggcgggcgttccccgcatgtacgagtccttg
ttcgaggggatcgagacccgggtgcggcagcgcgggcgcctggcggaatgcttgtttcat
catggcctgaatctcgcggtcgccttgcgcaggcattccgaaatcgccatcggccgcagc
gtgttcgcgcccctgcatcgcgagttcgctccggatcttcgaatgttgctgtgcggcggc
gcgatgctcgcgcccgatctggctttcaggctgactggcctgggattcgacctggcgacc
ggttacggcctgaccgagacctcgccggtgctgactttcaatgtgcccggccgagcccgc
ttcgatacggccggagcgccgctgcccggtgtcgagatccgcatcgcggagcccgagccg
ccggccgaatatggcgaggtactggccaaggggcccaacgtattcgccggatatcgcaac
ctgccggacaagacccgcgaggcgtttaccgcgaacgggttcttccgcaccggcgatctc
ggctatctcgaggacggctacctgcatttggtcggacgctcctccgaaatgatcgtgctg
cccggcggggaaaatattcgacccgagtacgtcgaggaggctttgagccggggttcgtat
atcaaggaggccgccgttctggaacaaaagggccggctggcggtactgatcgtaccggcg
ccggcggcgacccgagagggcggggatgtcgaggcgctgatcaggaaggacatcgagtcg
caatcccggcgcttgccttcacaccatcgaatcggcgatttcgccatcacgccggacccg
ttgccacgaacccacctcggcaagctgcgccggttcgagctggacgagattttccggacc
gccaaacggaagggagaagccgccgccggggagaccggtccgctgccgttcgagcggatg
gcgccggaagaccggcaattgctggaggaaccgaatgccctccggatctggaactggctg
gccgaacgttttcccgatgtgcgcctgatgccggatacaaacctccaaatcgacctgggc
gtggattcgctcgaatggttgagcttgggcctggagatgggcgccgacaccggggtggaa
cttgacgaggaggccatgggccgcgtgcagaccgttcgtgacctggtgcgagaaggtgcc
gagaccagcggcggagcggagggcgtacccaaagatcccttggttcgattatctcggccc
gatgcattgctcgacccggatcagcgtcgctggatcgagcctccgggcacctggtccagc
gcgttgggcattcttttgttcggtttcgaccgatggctgatggaacgtgcgttcggcgtg
aacgcggaaggcctggacgagctgccggtgaaccagccgttcatcctggttccgaaccat
gtcagctatctcgaccccatggcgatcgccgcggttctgccgcgggagcaactgctcaga
acgtgctgggccggttttaccggagtcatgttcaagaacgccctgatgcgccaggtcagc
cgttcgaccggcactttcccggtggatccacgccgcggcgccctggccagtcttgccctg
ggcgtgctggcgctcaggcgcggcaataatctggtgtggttcgcggaaagcagccgttcc
gcgagcggcgagctacagcctttcgagtccggaatcgggctgctgctgcgggcggtgagc
gtgccggcagtaccgctctggatcggcggtagctacacggcgctgccggtggggagctgg
gtaccccgcttcaggccgatcgaactccgcttcggatcgccggcgacggcggaagaactg
gagcaggaagggcagggcgagcatccggaccagcgcattgccgcggcactgcgtgaccgc
gtcgcccgcctgggttcgcgagcacgtgccatttga
DBGET
integrated database retrieval system
