Methylocaldum marinum: sS8_0954
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Entry
sS8_0954 CDS
T05638
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
mmai
Methylocaldum marinum
Pathway
mmai02020
Two-component system
mmai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
sS8_0954
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
sS8_0954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmai03000
]
sS8_0954
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mmai02035
]
sS8_0954
Transcription factors [BR:
mmai03000
]
Prokaryotic type
Helix-turn-helix
Other families
sS8_0954
Bacterial motility proteins [BR:
mmai02035
]
Flagellar system
Flagellar assembly proteins
Others
sS8_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
FleQ
bpMoxR
nSTAND3
AAA_16
AAA
AAA_7
ATPase
HTH_50
Motif
Other DBs
NCBI-ProteinID:
BBA32919
UniProt:
A0A250KT09
LinkDB
All DBs
Position
1040006..1041412
Genome browser
AA seq
468 aa
AA seq
DB search
MGLRRILLVQNDSALCSELKIILRFLECEVVACDLDALVDGPEPDFDAIFLCVDGNIETV
VLRIVELYRQAPLVLVMDAAAVKSLPMGLESRATSVLTWPTNYSALSVCLEKVGREAPEA
VNVRPSELFRSLTGASKAVQRTRKLIQQVAPSDATVLILGESGTGKEVIARHLHYYSSRR
SKPFVPVNCGAIPGELLESELFGHEKGAFTGALSSRQGRFELAEGGTLFLDEIGDMPLSM
QVKLLRVLQERCFERVGSNKTIQCDVRIVAATHRDLEEEIGRNRFREDLYYRLNVFPIEV
PSLRERLEDVPALVEDLTARLKAEKRGDMRLTPAALRVLQRYHWPGNVRELANLIERLAI
LYPNGVVDAPDLPEKFQQFVKPEDAAFAHEPDAESISPEGGLGLTRLPGDGLDLREHLNN
LECALIKQALDECNGVVAHAANLLRMRRTTLVEKLRKYGLRGEETTLI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgcgccgaattttattagttcaaaacgacagtgccttatgttccgaactgaag
ataattctccggttcctcgagtgtgaggtcgtcgcatgcgatttggatgccctcgtagac
ggcccggaaccggatttcgacgctattttcctctgcgtggacgggaatatcgaaacggtc
gttttgcggatcgtcgaactttaccggcaggctccgctcgttctcgtaatggacgccgcg
gcggtcaaatcgctgccgatggggttggaaagcagagctacctccgtattgacttggcct
accaattactcggcgctgagtgtttgcctcgaaaaggtcggccgggaagctccggaagcg
gtaaacgtccgtccatccgagctattccgcagcttgaccggcgccagcaaggccgtgcaa
cgaacgcgcaagctgattcaacaggtggccccgtccgatgcgacggttctgatcctcggc
gagtcgggtaccggcaaggaggtgattgctcgccatttacactattactcatcccgccgg
agcaaaccgttcgtacccgtgaattgcggcgccattccgggagaattgctggaaagcgag
cttttcggccacgagaagggcgcctttaccggagcgctcagctcccggcaagggcgtttc
gaattggccgaaggcggtacgctattcctggatgaaatcggcgacatgccattatccatg
caggtcaagcttttaagggtcctgcaggagcgctgcttcgaacgggtcggcagcaacaag
accatacagtgcgatgtccgcatcgtagccgccacccatcgtgatctggaagaggaaatc
ggtcgcaaccggttcagagaagacctttattaccgcctcaacgtttttcccatagaggtg
ccgtccttacgcgagcggctggaggacgtaccggccttggtcgaggacttgaccgcccgt
ctcaaggccgagaagcggggggacatgcgcctcacgcccgctgctctccgggttctgcag
cgatatcactggcccggcaatgtcagggaattggctaacctgatcgagcgtctggctatc
ctatatccgaatggtgtagtcgacgcgcctgacttgccggaaaaattccagcagttcgtc
aagccggaagacgccgcattcgcgcacgaaccggacgcggaaagcatatccccggaaggt
gggctcggacttacacggctgccgggagacggcttggatttgcgtgagcatctgaataac
ctggaatgcgccttgatcaagcaggccttggacgagtgcaacggagtcgtggcacatgcc
gccaatcttctcaggatgcggcggaccaccctggtcgaaaaactccgtaaatacggcttg
cgaggcgaggaaacgacactcatttga
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