Methylocaldum marinum: sS8_1006
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Entry
sS8_1006 CDS
T05638
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai00300
Lysine biosynthesis
mmai00470
D-Amino acid metabolism
mmai01100
Metabolic pathways
mmai01110
Biosynthesis of secondary metabolites
mmai01120
Microbial metabolism in diverse environments
mmai01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
sS8_1006
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
sS8_1006
Enzymes [BR:
mmai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
sS8_1006
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBA32971
UniProt:
A0A250KPR6
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Position
complement(1099767..1101014)
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AA seq
415 aa
AA seq
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MDYFNYRDGMLHAEDVPLAAIAERYGTPCYVYSRATIERHWRAFDAAFAGKPHLVCYAVK
ANSNLAVLNILARLGSGFDIVSVGELERVLAAGGDPAKIVFSGVGKREDELERALEVGIR
CFNVEVPGELDRLNRLAGALGVKAPISLRVNPDVDALTHPYISTGLRENKFGVDVGEALI
QYRRAADMPHLQVLGIDCHIGSQLTSVTPFLDALDRILLLADALKEHGIGLHHIDLGGGL
GIRYREEQPPEPSEYASALLQRLQQTNYEILIEPGRAIIGNAGVLVTRVEYLKSNQDKNF
AIVDAAMNDLVRPALYDAWQEIVPVRQLSGADVRTYDIVGPVCETGDFLGIGRELALSEG
VLLTIRSAGAYGFSMSSNYNSRPRPAEVMVDGLRTHLIRERETTAMLFRGEHVLD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggattatttcaattatcgcgacggcatgttgcatgccgaagatgtgccgttggctgcc
attgcagaacggtatggaacgccgtgctatgtttattcgcgcgctaccatcgaacgccac
tggcgcgcattcgacgcggctttcgccggcaagccgcacctcgtttgttatgcagtgaaa
gccaattccaatttggcggtattaaacatcttggcacgcttgggttcgggcttcgacatc
gtgtccgtaggcgaattggagcgggtattggcggcgggcggcgatccagcgaaaatcgtc
ttctccggagtgggcaagcgagaggacgaattggagagagcgctcgaagtcggtatccgc
tgcttcaacgtagaggtcccgggcgaattggaccggctaaaccggcttgccggagcactc
ggtgtgaaagctccgatttcgctgcgcgtgaatccggacgtggatgcgcttacccaccca
tacatatccacgggccttcgggagaacaagttcggcgtcgatgtcggcgaagcattgatt
caatatcggcgtgctgccgacatgcctcatcttcaggtactgggcatcgactgccacatc
ggttctcaactgacttccgtaacgccctttctggatgcactcgatcggatcctgcttctt
gcagacgccttgaaagaacacggaatcggtctccatcatattgatctaggagggggatta
ggcatccgctaccgcgaggagcagccaccggagcccagcgaatacgcgtcggctcttctg
cagcgactgcagcaaacgaattacgagattctgatcgaacccggccgtgccatcatcggt
aacgccggggttctggtgacccgcgtagaatatctgaaatccaatcaggacaagaatttc
gccatcgtcgacgccgccatgaatgatctcgttcgtcccgcgctctacgatgcctggcag
gagatcgtaccggttcgacaactaagtggcgcggacgtcagaacctacgatatcgtcgga
ccggtctgcgaaaccggggattttctcggtatcgggcgtgaacttgccctgtccgagggc
gttcttctgacgatccgttccgcgggcgcttacggattcagcatgagttccaattacaat
tcccgcccccggccagccgaggtcatggtggacgggctccgtactcacttgatccgcgaa
agggaaacgactgccatgcttttccggggcgaacacgttctagactga
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