Methylocaldum marinum: sS8_1009
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Entry
sS8_1009 CDS
T05638
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmai01002
]
sS8_1009
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmai01011
]
sS8_1009
Peptidases and inhibitors [BR:
mmai01002
]
Cysteine peptidases
Family C82
sS8_1009
Peptidoglycan biosynthesis and degradation proteins [BR:
mmai01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
sS8_1009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
BBA32974
UniProt:
A0A250KN25
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All DBs
Position
complement(1102685..1103674)
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AA seq
329 aa
AA seq
DB search
MLQKTIELARIDRWKSGWLAVALMLATPINGAAEIFALPTDGSDLIGEIQYTKARHEDTL
IDIAREFSIGQDEIVMANPTVDRWLPGNGKEVLIPRQFVLPDAPRAGVVINIPEMRLYYF
PVQPKVKATQVVTYPVSIGRMDWRTPLGATKIVQKVKDPVWIPPESIKEEHAREGDILPD
VVPAGPLNPLGTFAMRLGVPGYLIHGTGADKAYGIGMRVTHGCIRMYPEDIERLFPQVNV
GTQVHLVNQPVKLGWSNGILYMEVHQPLDEDRMTYEQLLDLAMDLIQNKTKQQQVVLDGA
AVRQALQQPTGIPIAISKPSDPPQTFGGT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagaagacaatcgagttggcgcgtatcgaccgatggaagtcgggctggctggcg
gttgccctcatgctcgccactccgataaatggcgcggccgagatattcgcgctacccacg
gacggcagcgaccttatcggggaaattcaatacaccaaggcgaggcatgaggatacgctg
atcgatatcgcgcgcgagttcagtatcgggcaggacgaaatcgtcatggccaatccaacc
gtagaccgctggctaccggggaacggcaaggaggtattgattccgcgccaatttgtcctc
cccgatgcgccacgtgccggcgttgtcatcaatattccggaaatgcgcctctattacttt
cctgttcagccgaaggtcaaagcgacacaggtcgttacctatccggtgagtatcggacgg
atggactggaggacacctttgggtgcgaccaaaatcgttcaaaaggtgaaggacccggtc
tggattccaccggagtccatcaaggaagagcacgcccgagaaggtgacattttgccggac
gtcgttcccgcaggtccgctgaatccgctcgggaccttcgccatgaggctaggcgttccc
ggctatcttatccatggtaccggcgccgacaaagcctatggcataggtatgcgagtaaca
catggatgcatccggatgtacccggaggatatcgagcgacttttcccgcaagtcaacgtc
ggcactcaggttcatttggtcaaccagccggtcaagctgggctggtcgaacgggatcttg
tatatggaagtccaccagcctctggacgaagaccgcatgacttacgaacagctactcgat
ttagccatggacctgatccagaacaaaacgaagcaacagcaagtggtgctggacggcgcc
gccgtaagacaggcacttcagcaaccaaccggaatcccgatcgccatctcgaagccgtcc
gatccgcctcagactttcggaggaacgtaa
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