KEGG   Methylocaldum marinum: sS8_1180
Entry
sS8_1180          CDS       T05638                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
mmai  Methylocaldum marinum
Pathway
mmai03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mmai00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    sS8_1180
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mmai02044]
    sS8_1180
Secretion system [BR:mmai02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   sS8_1180
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 Zeta_toxin Sigma54_activat AAA_7 AAA_14 NACHT nSTAND3 ATPase_2 TniB AAA_25 TsaE CbiA AAA_18 ResIII Clp_N T2SSE DUF815 Hpr_kinase_C Torsin SRP54 Seryl_tRNA_N NBD_SMAX1 Spectrin_Anc-1 TPR_MLP1_2
Other DBs
NCBI-ProteinID: BBA33142
UniProt: A0A250KNN0
LinkDB
Position
complement(1334335..1337052)
AA seq 905 aa
MGEISRVKLFGKLNRICYKAIESATVFCKLRGNPYVELAHWLHQLLQLQDSDLHRLIKQF
GIEPGRLAKDFTESLDRLPRGATSISDLSAHVEEAVERGWVYGTLMFGESQVRSGHLLVG
ILKTRGLRGELLGISKEFEKIGLEALTDRLAEFVAGSPEDGLGATDGFQAGGAVPGEASG
AMAPAAMGKQEALKQFTVDLTEQARQGKMDPIVGRDEEIRQVIDILMRRRQNNPILTGEA
GVGKTAVVEGFAQKIVAGDVPPPLREVSLRTLDVGLLQAGASMKGEFENRLRQVIEEVQS
SPKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPA
LTRRFQVVQVHEPSEEKAIRMMRGVVSVMEKHHRVQVLDEALESAVRLSHRYIPARQLPD
KAVSLLDTACARVAISQHAVPPEVDDCRKRIQALDTELDIIGRERSVGIDTVVRENRAMA
ELEAERERLESLEARWIAEKEVVEKILALRRQLREQTGKVEGTGSALEQAAEELEPAPAA
EAADRDALLVELKGLQNRLHELQGEHPLILPTVDAQAVASVVQDWTGVPVGRMVKNEIET
VLRLPDILEQRIIGQRHALEMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALAL
AEALYGGEQNVITINMSEYQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDE
VEKAHPDVHEIFFQVFDKGWMEDGEGRVIDFKNTLILLTTNAGTDLIMNLCRDPELMPEP
DGIAKALREPLLKVFPPALLGRLVVIPYYPLSDEMIGAIARLQLGRIEKRIRETHKVPFS
YDDEVIKLITSRCTELESGGRMIDAILTNTVLPRISEEFLVRMMEGKTIERVHVSVEEME
FKYVF
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgggagaaatcagccgggtcaagcttttcggcaaacttaaccgaatttgctacaaagcc
atcgaaagcgcgacggtgttttgcaaattgcggggcaatccttacgtggaattggcgcat
tggctgcaccagctgctccagctccaggattcggatctgcaccgtcttatcaagcagttc
ggcatcgaacccggccgcctggccaaagacttcaccgagtcgctcgatcgcttgccgaga
ggggcgacttccatatccgacctgtctgcgcacgtcgaggaggcagtcgagcgtggatgg
gtatacggaaccctgatgttcggagaaagccaagtccgctcgggccacctgctcgtcggc
attttgaaaaccaggggactgcgcggggaactgctgggcatttccaaggaattcgagaaa
atcggactcgaagcactgaccgatcgcttggctgaattcgttgccggttcgcccgaagac
ggattgggcgcgaccgacgggtttcaggcgggcggtgcggttcccggagaagccagcggc
gcgatggcgcctgcagccatgggcaagcaagaggcgctcaagcagtttaccgtcgacctg
acggagcaggcgaggcagggaaaaatggaccctatcgtcgggcgtgacgaagagatccgc
caggtcatcgatatcctcatgcgccgccggcagaataaccctatcctgaccggcgaggcg
ggcgtcggcaaaaccgccgtggtcgagggcttcgcccagaaaatcgtggccggcgacgtt
cctccgccactgcgggaggtgagtctgcgtaccctggacgtcgggctcctacaggccgga
gcgagcatgaaaggggagttcgagaatcgtctccggcaagtcatcgaggaagtccagtcc
tcgcccaagccgatcatcctgttcatcgacgaggctcatactctggtgggagcgggggga
gcggccggtaccggcgacgcggccaacctgttgaaaccggctctggcgcgcggcaccttg
cggaccgtagcggcgacgacctgggcggaatacaagaagcacatcgaaaaagacccggca
ttgacgcggcgcttccaggtcgtacaggtgcacgagccgagcgaggagaaagccatacgc
atgatgcgcggcgtggtttccgtaatggaaaagcatcatcgggtgcaggttctggacgag
gcgctggaatccgccgtcagactgtctcaccgttatattccggcccgccagctccccgat
aaggcggtcagccttctcgataccgcctgcgcccgagtggccatcagccagcatgccgtc
ccgccggaggtggacgattgccgaaagcgcatacaggcgctggataccgaactggacatc
atcggccgggaacgttcggtgggaatcgacaccgtggttcgcgaaaatcgcgcgatggcc
gaactggaggccgaacgtgaacggctggaatcattggaagcgcgctggattgcggaaaag
gaagtggtcgaaaaaattctggccctgcgccggcaactccgggaacagaccggaaaggtc
gaaggcaccggaagcgccctggagcaggcggcggaagagttggaaccggcccctgccgcc
gaagcggcagatcgagacgcgctactggtcgaactcaagggcttacaaaaccggttgcac
gaattgcaaggcgaacatcccttgatcctgcccaccgtcgacgcacaggccgtagcctcg
gtagtgcaggactggacgggcgttccggtcggccgcatggtgaaaaacgaaatcgaaacc
gtgctcagactgccggacatcctggaacagcgcatcatcggccaacgccatgcgctggaa
atgatcgccaagcgtattcagacttcccgtgccggtctcgacaatcccaacaagccgatc
ggcgtctttatgcttgccggaacctcaggcgtcggcaagaccgaaaccgccctggccctg
gcggaagctctctacggcggcgaacagaacgtcatcaccatcaacatgagcgaataccag
gaggcgcacaccgtctctacgctcaagggtgcgccgccgggttacgtcggctacggcgag
ggcggtgttctgaccgaagcggtgcggcgtcggccctatagcgtggtgctgctggacgaa
gttgaaaaagcccatccggatgtacacgaaattttctttcaggtgttcgataaaggctgg
atggaagacggcgagggcagggtaatcgacttcaagaacaccctgattctcctgaccacc
aacgcgggcacggacctcatcatgaatctgtgcagagatccggagctgatgcccgaaccg
gacggtattgccaaggccttgcgcgagcctctgctcaaggttttcccgccggccctgttg
ggccgcctcgtcgtgattccctattacccgctgagcgacgaaatgatcggtgccattgcc
cgattgcaactcggccgcatcgaaaagcgcattcgggaaacccacaaggtaccgttcagc
tacgacgacgaggtgataaaactcatcaccagccgctgcaccgaactggaaagcggcgga
cgcatgattgatgcgattttgaccaacacggtattgccccggattagcgaggagttttta
gtacggatgatggaagggaaaactatcgagagggttcatgtgagcgtggaggaaatggaa
tttaagtatgtgttttga

DBGET integrated database retrieval system