Methylocaldum marinum: sS8_1261
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Entry
sS8_1261 CDS
T05638
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmai03016
]
sS8_1261
Enzymes [BR:
mmai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
sS8_1261
Transfer RNA biogenesis [BR:
mmai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
sS8_1261
Prokaryotic type
sS8_1261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Sas-6_helical
Motif
Other DBs
NCBI-ProteinID:
BBA33223
UniProt:
A0A250KNE4
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All DBs
Position
complement(1421043..1421975)
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AA seq
310 aa
AA seq
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MSRRNDLRSIDGVLLLDKATGMTSNAALQKVKRVLKARKAGHTGSLDPLASGLLPICLGE
ATKLSGFALNTDKRYRVKVRLGVTTLTGDCEGETVETRTVPPLSEDVLERVLAGFRGEIF
QVPPMFSALKHQGRRLYDLARQGIEVEREPRRIVIYELKLLDFDSSSLELDVECSKGTYI
RSLAEDIGKALDCGGHVEQLRRTWVGNLSIAEAHTLESLESLDEGELLQRLLPMDRIISA
MPAVQLSDELGFYVRKGQAVRVSGSPHDGWVRLYVKQSVFLGVGEILSDGRVAPRRLVKV
GQDNVRELSC
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgccgcaacgatctacgctccatcgatggtgtcctgctgttggacaaagccaca
ggcatgacctcgaatgcggcgctgcaaaaggtcaaacgggttttgaaggcacgcaaggcc
ggccataccggtagccttgatccgttggccagcgggctgcttccgatctgcttgggcgaa
gcgacgaagttgtccggatttgccttgaatacggacaagcgctatcgggtgaaggtcagg
ctaggggtgacaacgctcaccggcgattgcgaaggcgagactgtcgaaaccaggaccgtg
ccgccattgagcgaggatgttctcgagcgggttctggccggttttcgtggcgagattttt
caggttccgcccatgttctcggcgctcaagcatcaggggcggcgtctttatgatttggct
cgccaaggcatcgaggtagaacgtgagcctcggcggatagtcatctacgaattgaagctg
ctggatttcgattcgtccagcctggaactggatgtcgagtgttcgaagggtacctatatt
cgatccttggccgaggatatcggcaaagcgttggattgtggcggccatgtcgagcaattg
agacgcacctgggtcggtaatctgtcaatcgccgaggctcacacgcttgagagtttagag
tccctggacgaaggcgaactgctgcaacggctcctgcccatggatcgcatcatatcggcc
atgcctgcggttcaactgagtgacgaactgggtttttacgtacggaaaggtcaagccgtt
cgggtttccggatccccccacgatgggtgggtcaggttgtacgtgaaacaatccgtattt
ctcggcgtgggcgaaattctaagcgacggacgcgtggcaccgcggcgtctcgtcaaagtg
ggtcaggacaatgttcgggagttgtcctgttaa
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