Methylocaldum marinum: sS8_1512
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Entry
sS8_1512 CDS
T05638
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmai03032
]
sS8_1512
03400 DNA repair and recombination proteins [BR:
mmai03400
]
sS8_1512
Enzymes [BR:
mmai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
sS8_1512
DNA replication proteins [BR:
mmai03032
]
Prokaryotic type
DNA Topoisomerases
sS8_1512
DNA repair and recombination proteins [BR:
mmai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
sS8_1512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF1272
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
BBA33472
UniProt:
A0A250KPL8
LinkDB
All DBs
Position
1691200..1693500
Genome browser
AA seq
766 aa
AA seq
DB search
MSQNLVIVESPAKAKTIEKYLGRDFQVYASYGHVRDLVPKEGAVDPDHDFAMKYEIIEKN
EKHVQTITKAAQKADALFLATDPDREGEAISWHIYEILKNKRVLGNKPVHRVVFHEITKR
AITEAIQNPKALSTDLINAQQARRALDYLVGFKLSPLLWKKIRRGLSAGRVQSPALRMIV
EREIEIENFKVQEYWTLEADASAEGQQFRARLINLNNAKLEQFSIVTEEQANQARDALLA
EANGKLRVVKIEEKERKRNPAAPFTTSTLQQEAARKLGFTTKRTMAIAQQLYEGIDLGGE
TTGLITYMRTDSVNLANEATQEIRQLIESRFGKENLPKQPPHYKTKSKNAQEAHEAIRPT
SAFRLPEQVKPYLSPEQYKLYNLIWKRTVACQMIHATIKTVSVDLSCGTIGIFRATGSTV
VNPGFMSVYLEGKDDASSDDDESFLPGLKEGQWVDLLDIITAQHFTEPPPRYTEASLVKA
LEEYGIGRPSTYAAIISTLQQRHYAVLENKRFHPTDVGRIVNKFLTEHFNQYVDYNFTAN
LEDDLDAVSRGERNWIPLMRDFWYPFKSLIDAKDESLKRADVTHELLDETCPECGGQLSI
RLGRNGRFIGCTNYPECKYTRNMTGEAASAAPEVVEGKLCPECSSPLVIKTGRFGKFIGC
SNYPKCKHIEPLEKPEDTGVRCPECNKGHLIKRKSRFGKLFFSCNTYPTCSYAVWNPPIA
EPCPNCGWPILTLKVTKRRGTEKVCPRKECGYAAPYEGEPLAEPAT
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaacctggtcattgttgaatcgccagcaaaagccaagaccattgaaaagtat
ctcggccgagattttcaggtctatgcgtcctatggccatgtccgcgacctcgttcccaag
gaaggagcagtcgatcccgatcatgatttcgcgatgaagtacgaaattatcgagaaaaac
gagaagcacgtacaaaccatcaccaaggccgctcaaaaagccgacgccctgttcctcgca
accgacccggatcgcgaaggcgaagccatttcctggcacatctacgagatcctgaagaac
aaacgtgtgctcgggaacaaaccggtgcatcgtgtggttttccatgagatcaccaagcgg
gcgatcaccgaggccatccagaatccgaaagccctttcgaccgatctgatcaacgcgcag
caggcgcgccgggcgctggattatctggtcggcttcaaactttccccgctactgtggaaa
aagattcgccgcggactgtccgccggccgggtgcaaagtccggcgctgcggatgatcgtc
gagcgcgagatcgaaatcgagaactttaaggttcaggaatattggaccctcgaagccgac
gccagtgcagaagggcaacaattccgcgctaggctcatcaacctaaataacgccaagctc
gagcagttcagcattgttaccgaggagcaggcgaatcaggccagggacgcactgcttgcc
gaggccaatggaaagctccgcgtagtcaagattgaagaaaaggaacggaaacgaaatccc
gcagcaccgttcaccacttccacgttgcagcaggaggcggcgcgcaagctgggattcacc
accaaacgcacgatggccatcgcccagcagctttacgaaggaatcgacctgggcggcgag
accaccggcctgattacctatatgcgtaccgactcggtcaatctggccaatgaggcaacc
caggaaatccggcaactgattgagtcccgcttcggcaaagaaaacctgcccaagcagccg
cctcattacaagacgaagagcaaaaacgctcaggaagcccacgaggccattcgtccgacg
tccgcttttcggttgccggaacaggtcaagccctatctcagtccggagcagtacaagctt
tacaacttgatctggaagcggaccgttgcctgtcagatgatccacgccaccataaagacg
gtgtcggtcgacctgtcctgcggcacgataggcatctttcgcgctaccggctctacggtc
gtgaacccgggtttcatgagcgtctacctcgaaggcaaggatgacgcctccagcgacgat
gacgagagttttttgcccgggctcaaggaaggtcagtgggtcgatttgctcgatatcatc
accgcccagcacttcaccgaaccgccgccgcgttacacggaagcgagtttggtcaaggca
ttggaggagtacggtatcggccgcccgtcaacctatgcggcgattatttcgaccctgcag
cagcgtcattacgccgtgctggaaaacaagcggtttcatccgacggacgtggggcgaatc
gtcaacaaattcctgacggaacacttcaaccaatacgtcgattacaacttcacggccaat
ctggaggacgatctggacgccgtctcgcgcggagaaagaaattggattcctctgatgagg
gacttctggtacccgttcaagtcgctgatcgacgccaaggacgaaagtctgaaacgtgcg
gacgttacgcatgagttgctggacgagacctgtcccgaatgcggcggacagctgtccatt
cggctgggacgcaacggccgctttatcggctgtaccaactatcccgaatgcaaatacacc
cgcaatatgacgggcgaggcggcgtctgccgccccggaagtcgtggaagggaagctctgt
ccagagtgctcctcgccgctggtcatcaaaaccggccgattcgggaaattcataggctgt
agcaactatcccaaatgcaagcacatcgaaccgctcgaaaagcccgaggacacgggcgta
cgctgcccggaatgcaataagggccatttgatcaaacggaagtcgcgcttcggaaaacta
ttcttttcctgcaacacctatccgacttgcagctacgccgtctggaatccgcccatcgcg
gaaccctgtcccaactgcggctggcctatcctgaccctcaaagtcaccaagcggcgcggc
accgaaaaagtctgtccgcgcaaggagtgcggctatgccgccccctacgaaggcgagccg
ctggcggaacccgcaacctag
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