Methylocaldum marinum: sS8_2153
Help
Entry
sS8_2153 CDS
T05638
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai03030
DNA replication
mmai03430
Mismatch repair
mmai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
sS8_2153
03430 Mismatch repair
sS8_2153
03440 Homologous recombination
sS8_2153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmai03032
]
sS8_2153
03400 DNA repair and recombination proteins [BR:
mmai03400
]
sS8_2153
Enzymes [BR:
mmai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
sS8_2153
DNA replication proteins [BR:
mmai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
sS8_2153
DNA repair and recombination proteins [BR:
mmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
sS8_2153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
DUF655
SSB
Motif
Other DBs
NCBI-ProteinID:
BBA34105
UniProt:
A0A250KR11
LinkDB
All DBs
Position
2392962..2396486
Genome browser
AA seq
1174 aa
AA seq
DB search
MTEALDPRFIHLRVHTEYSLVDGLVDVKALVKRTAAMGMPAVAVTDQSNLFALVKFYKSA
LAEGVKPIAGADVLLYNEADPASPHGMTLFVQNTGGYRTLTELISRSYRENQHQGVPLLM
PEWLEEKNEGLLALSGGRRGDIGQALLMGNGGEAKRLLEHWLRVFDQRFYLELQRTGRPS
EEEYIEGAVNLAIEFDAPVVATNDVRFISPSEFEAHEARVCIHQGRVLDDPRRPRDYTEQ
QYLRSPEEMAQLFADLPEALENTVEIAKRCNIELTLGKNFLPKFPVPEGMSTAEYFAEES
RKGLKERLALRPPTGKGTLEERHKRYEERLELEISVINQMDFPGYFLIVADFIQWAKKNG
IPVGPGRGSGAGSLVAYALKITDLDPIEFELLFERFLNPERVSMPDFDVDFCMERRDEVI
DYVARTYGRDRVSQIITYGSMAAKAVVRDVGRVLGHSYGFVDKIAKLIPFELGITLEKAL
TDSEDLRKLYESDEEVRTLIDLAKSLEGITRNAGKHAGGVVIAPSQLIDFSPLYCEPGGE
NLVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWALDTINRQRAEKGEPPVDIARIPLDDPA
AYKLLKNCQTTAVFQLESRGMKDLIRRLQPDCFEDIIALVALFRPGPLQSGMVDDYINVK
HGRTKAEFPHPVLEPILKPTNGVIVYQEQVMQIARDMAGYTLGGADLLRRAMGKKKPEEM
AKQREIFVSGSITLGVDENIAGYIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKAHFPA
AFMAAVLSSDMDNTDKVVVLIEECREMKLAVQPPDINRSEYRFAVLNDRTILYGLGAIKG
VGETAIRDILEERKRGGAFEDLYDFCRRVDLRKVNRRVIEALVRSGTLDSIDPNRARHMA
ELSDAIKAAEQHGAMAATGQDDLFGLGGPAAEEDAPRAVAVVEPWPEDERLAYEKVTLGL
YLTGHPIGPYESEIQHFITGRLGKLSLDNERGPAGPGRREMRAVVAGLVVELRARQNKNG
KRMAFATLDDRTGRLEVAVFSEVLEKYREHLVKDTLLVVEGNLSFDDYAGQLRLTAENLY
TMAEARAHFAKHLFIQWPSPEANTVPSEGHWVSELVDLLAPFRGGSCPIYIEYRGKAAQT
TIQLGEAWRVHPGDELLARLQKRVGTDKVKLHYQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagctctcgatccccgtttcattcacctgcgcgttcacactgaatattccctg
gtcgacggcctggtggacgtaaaggcgctggtcaagcgcactgccgcgatgggcatgccg
gccgtggcggtgaccgaccagtccaatctgttcgccctggtcaagttctacaaatcggcc
ttggccgagggcgtgaagcccatcgccggagcggacgtcctgctgtataacgaagcggac
ccggcttctccgcacggaatgacgctgttcgtacaaaataccggcggataccgcaccctg
accgagctgatatcgcggagctatcgggaaaatcaacaccagggcgtgcccttgctgatg
ccggaatggctggaagaaaagaacgagggactcctggcgctatcgggcggacgtcggggc
gacatcggccaggccttgctgatgggcaacggcggcgaggcgaaacgcctgctcgagcat
tggctcagggttttcgaccagaggttttacctggaactgcagcgcaccggccggccgagc
gaagaagaatacatagaaggcgcggtaaacctcgcgatcgaattcgatgcgccggtggtc
gccaccaacgacgtgcgctttatcagcccttccgagttcgaggctcacgaagccagggtc
tgcattcaccaaggccgggtcctggacgaccctcgccgtccccgtgattacaccgagcag
caatatctccgcagcccagaggaaatggcgcagttgttcgccgatctccccgaagccctg
gaaaacacggtcgagatcgccaagcgctgcaatatcgaactgaccctgggcaagaacttt
ctgcccaagttcccggtgcccgagggcatgagcacggcggaatattttgccgaagaatcg
cgcaaaggcctgaaggaacgtttggccctgcgcccgccgaccggaaaaggaacactggaa
gaacggcacaagcgatacgaggaaaggctggagctggaaatttcggtgatcaaccagatg
gatttccccggctatttcctgatcgtggcggacttcatccagtgggccaagaaaaacggc
attccggtgggaccgggacgcggctccggcgcgggctcgctggtggcctacgcactcaag
atcaccgatctcgaccccatcgaattcgaactgctattcgagcgtttcctgaaccccgag
cgcgtatccatgcccgacttcgacgtcgatttctgcatggagcgacgcgacgaggtcatc
gattacgtggcccgtacatacgggcgagaccgagtatcccagatcatcacctacggcagc
atggcggccaaggcagtggtgcgcgacgtggggcgggttctggggcattcctacggtttc
gtggacaagatcgccaagctgattccgttcgagctgggtattaccctggaaaaggctctc
accgacagcgaagacctcagaaaactctacgaaagcgacgaggaagtccgaacgctgatc
gacctcgccaagtcgctggaaggcattacccgcaatgccggcaagcacgccggcggcgtc
gtcatcgcgccgtcccagctgatcgatttttccccgctgtactgcgaaccgggcggcgag
aatctggtgacccagttcgacaaggacgacgtggaagcggtgggcctggtcaagttcgac
tttctgggactgagaaccctcaccatcatcgactgggcgctggacaccatcaacaggcag
cgggccgaaaaaggcgaaccgccggtcgatatcgcccggatccccctggacgatcccgcc
gcctacaagctgctgaagaactgccagaccaccgccgtcttccagctcgaatcgcgcggc
atgaaggacctgatccggcgcctgcagccggactgcttcgaggacatcatcgccctggtg
gcgctgttccgtccggggccgctgcaatcgggcatggtcgacgactacatcaacgtcaag
cacggccgcaccaaggctgaatttccgcatcccgtcctcgaacctatcctcaagcccacc
aatggcgtcatcgtctatcaggaacaggtgatgcaaatcgcccgggacatggccggttac
accctgggcggcgccgacctcctgcgccgcgccatgggcaagaagaagcccgaggaaatg
gccaagcagcgggaaatcttcgtctccggttcgatcacgctgggcgtcgacgaaaacatc
gccggctacatcttcgacctcatggagaagttcgccggctacggcttcaacaagtcgcac
tccgcggcttacgcgctggtgtcctaccagaccgcctggctcaaggcgcattttccggcc
gctttcatggcggcggtactgtcctcggacatggataataccgacaaggtcgtggtcctg
atcgaagaatgccgggaaatgaaactggcggtgcagccacccgatatcaaccgctcggag
taccgcttcgcggtgctcaacgaccgtaccatcctatatggtcttggcgcgatcaaaggg
gttggcgaaacggcgatccgggatattctcgaggagcgcaaacgcggcggcgcgttcgag
gatttgtacgacttctgccgccgggtcgacctgcgcaaggtgaaccgccgggtgatcgaa
gccctggtccgttccggcaccctggattccatcgatccgaatcgcgcgcgccacatggcg
gaactgtcggatgcgatcaaagccgccgaacagcacggcgccatggccgcgaccggacag
gacgatttgttcgggctcggaggtccggcggcggaagaagatgcgccgcgggcggttgcg
gtcgtggaaccgtggccggaagacgaacggctggcctacgaaaaggtgacattgggcctg
tacctcacgggccatccgatcggcccgtacgaatccgaaatccagcacttcatcaccggc
cgcctcgggaagctgtcgctcgataacgagcgcggaccggccggacccggccggcgcgaa
atgcgggcggtggtcgcggggttggtggtggaactccgtgcccggcagaacaagaacggc
aagcgcatggccttcgccaccctggacgaccggaccggacggctggaagtcgccgtattt
tcggaagttctggagaagtaccgggaacatttagtgaaggacacgctgctcgtggtcgag
ggcaacctgagtttcgacgactacgccggccagctccgtctcacggcggaaaacctgtac
accatggcagaggctcgggcgcactttgccaaacatcttttcattcaatggccctcgccc
gaggcgaataccgtcccatcggaaggccactgggtcagcgaactcgtagatctgctcgcg
ccatttcggggggggagctgtccgatttatatcgagtaccggggaaaagccgcgcaaacg
acgattcagctaggggaagcatggcgcgtacatccaggcgacgaactgctcgcgcgtctg
caaaaacgtgtcggaacggataaagtgaagctgcattaccaatga
DBGET
integrated database retrieval system
