Methylocaldum marinum: sS8_2208
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Entry
sS8_2208 CDS
T05638
Name
(GenBank) MutS family DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
mmai
Methylocaldum marinum
Pathway
mmai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
sS8_2208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmai03400
]
sS8_2208
DNA repair and recombination proteins [BR:
mmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
sS8_2208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BBA34160
UniProt:
A0A250KR82
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Position
complement(2459447..2461045)
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AA seq
532 aa
AA seq
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MNSPYKTLLQSDSKEPPVVRSTVPGATGKGVIDASTFQAIEVNKLFDSVNHAATIAGQAT
LYRSLVEPLAGADLIRAKQDAVREIESDKPLRESLDALIRQAKSLEEDFYALLFGTFMGL
VSSPAHKLEIEGYGYETYKKGTRFMLDMVAAANRLPKPNSEYLGLLIDDLRRFADSRAYA
LMKGPVYRTEKDVKTKAEKPWYVPAIKFRPSLFKPVGLTLAVLLLILALEFVPLLLDMAM
SIAPVFWLFLLPISLVYIPIVGGFDRDGCIYPLRDIFKKSEEVQNTLDSLGKLDELLSFV
RLKESFHHPMVLPRIVEAERHSLVFKGVRNPVLSKDNPDYVPNDISLKNTRLTFVTGPNS
GGKTAFCKTLAQSQLLAQIGCSVPAQEAELTVADRIFYQVPEISHLADGEGRFGTELKRT
KDIFLATTPKSLVIMDELSEGTTHEEKIEISMNILDGFYQKGSNTLLITHNHELVDAFQK
KGIGLARQVEFKNEQPTYRVVEGISRVSHADRVARKIGFSKEDIARYLSGGR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaattccccgtacaaaactctattgcagtccgattcgaaggagcctccggtcgttcgt
tccacggtacccggcgcgaccggaaagggcgtcatcgatgcttcgacatttcaggccatc
gaagtgaacaagctgttcgacagcgtcaaccacgccgccacgattgccgggcaggccacg
ctttaccgttcgctggtggagccgctggccggggcagacctgattcgggccaagcaggac
gcggttcgcgagatcgaatccgacaagccgctgcgggagtcgctggacgctctgatcagg
caggcgaagtctctggaagaggacttttatgccttgttattcggaaccttcatggggctg
gtgagttcgccggcgcacaagctggagatcgagggctacggttatgagacctacaaaaaa
ggcactcggttcatgctcgatatggtggcggcggcaaatcggcttccgaaaccgaattcc
gagtatctggggctattgatcgacgacttgcggcgcttcgccgattcgcgcgcctatgcg
ctgatgaaggggccggtgtaccggaccgagaaagatgtcaaaaccaaggcggagaagccc
tggtatgtcccggcaatcaagtttcggccgtcgctgttcaaaccggtggggcttacgctt
gcggtgctcctcctgatactggcgctcgaattcgtgccgcttctgctcgatatggcgatg
tcgatcgcgccggtattctggctgttcctgctgcccatcagcctggtttatattcccatt
gtcggcggtttcgaccgcgacggctgcatctatccgctgagggacattttcaagaagtcg
gaagaagtgcaaaacacgctcgattcgctgggcaagctggacgaactcttgagcttcgtc
cgcctcaaggaatccttccaccacccgatggtcttgcccaggatcgtcgaagccgagcgc
cattccctggtgttcaaaggggtgcgaaacccggtgctcagtaaggacaatccggactac
gtgcccaacgacatcagccttaaaaacacgcggctcaccttcgtcacaggcccgaacagc
ggcggcaagacggcgttctgcaagaccctggcgcagagccagttgcttgcgcaaatcggg
tgttctgtgccggctcaggaagcggaattgacggttgccgaccgcattttctaccaggtg
ccggagatcagccatctggccgatggtgaagggcgcttcggcaccgagctcaagcgcacc
aaggatattttcctcgccacgacgccgaaaagcctggtgatcatggacgaactctcggag
ggcacgacgcacgaggaaaagatcgagatctcaatgaatattctggacgggttttatcag
aagggcagtaacaccctgcttattacccacaatcacgaattggtcgatgcctttcagaaa
aagggaatcgggctggcgcggcaagtcgagttcaagaacgaacaaccgacctaccgggtg
gtcgaaggcatttcgagagtcagccatgcggaccgtgttgcccgcaagatcggtttttcg
aaagaggatattgcccggtatttgtcgggcggcagatga
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