Methylocaldum marinum: sS8_2230
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Entry
sS8_2230 CDS
T05638
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmai03009
]
sS8_2230
Enzymes [BR:
mmai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
sS8_2230
Ribosome biogenesis [BR:
mmai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
sS8_2230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_11
TRAM
RrnaAD
Methyltransf_15
PCMT
Methyltr_RsmB-F
Methyltransf_12
Methyltransf_23
CMAS
PrmA
Ubie_methyltran
Methyltrans_SAM
Methyltransf_32
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
BBA34182
UniProt:
A0A250KRK1
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All DBs
Position
complement(2484126..2485460)
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AA seq
444 aa
AA seq
DB search
MAARARKKPLPKEAFPAHIESFAHDGRGVAHIEGKAVFIDGALPGEDVSFVYTAIRRDYA
EGKVEEVVTPAPGRVQPRCPSFGVCGGCSFQHLADAAQIEEKEKLLADQFRHIGKIEDVP
LWPPLTGPHWGYRRKARLGVKYVLKKGRVLVGFRERSSPFIADLASCAVLHPKVDERLQD
MSELIGSLGIKDRLPQIEVAVGDERAALVFRILEDASPDDLDRLKAFGIRFEFDIYLQRH
GPDSIVPLYPENPPMLSYSLLNQGIEFRFKPTDFTQINIDINRKMVDRVMEVLDPAPGDA
VLDLFCGIGNFTLPIGKRASRVIGVEGSSESVERARENAEVNGLDNLEFHVADLCQSSDE
PEWAKRRYDRILLDPSRAGAEEVLSYVPRWGASRIVYVSCNPSTLARDAGILVHRHGYRL
VRAGVMDMFPQTAHVESIALFEKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgagcgcgcaagaaaccgcttccaaaggaggcgtttcccgcacatatcgaa
tcgtttgcccatgacgggcgaggcgtggcgcacatcgaaggcaaggcggtattcatcgac
ggcgcgctgccgggtgaagacgtgagcttcgtctatacggcgattcgccgcgattatgcc
gaaggcaaggtcgaggaggtcgtaacgccggccccggggcgggttcaacctcgctgcccg
agtttcggcgtctgcggcggttgtagcttccagcatcttgccgacgcggcgcaaatcgaa
gaaaaggaaaagcttttggcggatcagttccggcacatcggaaagattgaagacgtgcct
ttgtggccgcctttgaccggtccgcactggggttaccgccgcaaagcccgtctcggcgtt
aagtatgtgctgaagaaggggcgggtgctggtcggatttcgtgagcgttccagccctttt
atcgccgatctggcgtcctgcgcggtgttgcatccgaaagtggacgagcggttgcaggat
atgtccgaactgatcggttcgctaggcatcaaggaccggctgccgcagatcgaggtcgcc
gttggcgacgagcgtgctgcgctggtgttccgtatcctcgaggatgcctcgccggacgat
ctggatcggctgaaggcgttcggcatacggttcgaattcgacatttacctgcagcggcac
ggccctgattcgatcgtcccgctttatcccgagaatccgccgatgctcagctattcgctc
ctgaatcaaggcatcgaattccggttcaagcccaccgacttcacgcaaatcaacatcgac
atcaatcgcaagatggtggatagggtgatggaagtgctcgaccctgctcccggcgacgcg
gtgctcgaccttttttgcggaatcggcaatttcaccttgccgatcggcaagcgcgcgagc
cgggtgatcggcgtcgaaggcagttccgagtcggtcgagcgcgcccgcgagaatgcggag
gtcaacggtctcgataacctcgagtttcatgttgccgatctctgccaatcctcggatgaa
ccggagtgggcaaagcgccgatatgacaggattctgctcgatccgtcccgcgccggtgcc
gaagaggttttgtcctatgtgccgcgctggggagcgagccgcatcgtctacgtctcctgc
aatccctccaccttggccagggacgccggcatcctggttcaccggcacggctatcgtttg
gtccgcgcgggcgtcatggacatgtttccgcagacggcgcatgtcgagtccatagcattg
ttcgagaaagggtag
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