Methylocaldum marinum: sS8_2383
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Entry
sS8_2383 CDS
T05638
Name
(GenBank) RNA polymerase sigma-28 subunit FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
mmai
Methylocaldum marinum
Pathway
mmai02020
Two-component system
mmai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
sS8_2383
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
sS8_2383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmai03021
]
sS8_2383
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mmai02035
]
sS8_2383
Transcription machinery [BR:
mmai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
sS8_2383
Bacterial motility proteins [BR:
mmai02035
]
Flagellar system
Flagellar assembly proteins
Stator
sS8_2383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Rv2175c_wHTH
HTH_10
HTH_38
UPF0122
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
BBA34335
UniProt:
A0A250KRP8
LinkDB
All DBs
Position
complement(2652227..2653006)
Genome browser
AA seq
259 aa
AA seq
DB search
MSGIALYASVQAPGLDAIVGQHAALVKRIAYHLMGRLPSNVQIEDLIQAGMVGLLEAARQ
YDHAQGASFETYAGIRIRGAMLDELRRYDWTPRSVHRKARDVAEAMRAIEARTGRDARDA
EVAEYLGLSLSEYHQVLQDAVSCRIFSFEELLEGGDSVLDDCADSAAPPVEVLTQSGFAE
ALADAIGGLPERERLVISLYYEEELNLREIGEVLGVSESRVCQLQSQAMLRLRARMQGWL
DAEPPAAAPARRKRRAAHV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcattgccttgtatgcatcggtacaggcgcccggtttggacgccatcgtgggg
cagcacgctgcgctggtcaagcggatcgcctaccatctcatgggccggctgccctccaac
gtgcaaatcgaggacttgatccaggccggtatggtgggactgctggaagcggcccgccag
tacgaccacgcccagggcgccagcttcgaaacctatgccgggattcggatacgcggcgcc
atgctggacgaactgcggcgttacgactggacgccgcgttcggtgcaccgcaaggcgcgc
gatgtggcggaagcgatgcgagccatcgaggcccggaccggccgcgacgcccgcgatgcg
gaagtcgccgagtatctgggcttgtccctctccgaataccaccaggttcttcaggatgcc
gtgagctgccgtattttcagtttcgaagaactcctggaaggcggcgattcggtcttggac
gactgcgcggattccgccgcgccgccggtcgaggtattgacccagtccgggtttgccgag
gcgctcgcggacgccattggcggattgccggaacgtgaacggctggtgatttctctttat
tacgaggaggaactcaatctgcgtgaaatcggcgaagtgctgggcgtcagcgaatcccgg
gtatgccagctgcaaagccaggccatgttgcgcctgagagcgcggatgcagggctggctg
gatgcggagcctcccgccgcagctcccgcgagaagaaagcgcagggcggcgcacgtctga
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integrated database retrieval system
