Methylocaldum marinum: sS8_2453
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Entry
sS8_2453 CDS
T05638
Name
(GenBank) LysM domain protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmai01002
]
sS8_2453
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmai01011
]
sS8_2453
Peptidases and inhibitors [BR:
mmai01002
]
Cysteine peptidases
Family C82
sS8_2453
Peptidoglycan biosynthesis and degradation proteins [BR:
mmai01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
sS8_2453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
SPOR
LysM
LTM
Motif
Other DBs
NCBI-ProteinID:
BBA34405
UniProt:
A0A250KRW2
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All DBs
Position
complement(2723578..2724774)
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AA seq
398 aa
AA seq
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MLEDIEHNRFALGKSDSVVGQLATVQLEKGDSLPDVARHFGLGLQEIAEANPGTDLWVPE
SGRTLILPMQFVVPDTVRKGLVVNLAAMRLFYFPSKTSGEVITFPVGIGREGRSTPTGEM
SIVRKAAHPAWYVPASIRKDHALKGDPLPAVVSPGPDNPLGDYAMYLSRPSYLIHGTNKP
YGIGLRASNGCVRLYPENIEALYRQVPVKTPVHIVNQPYLVGWRDGELYLEAHKPHEELD
GKRLKKALMSELKKIEKKAGRKLDLPRIERILSEARGIPIPIFENSDNLDQLVSNAVAVK
YPDELFGQPKPPAMTDRGWYITALESGDELSARRMAAVLNHQGPQIPARVVPLANGRFRV
IAGPFKSSRATKEAARRMKIDLDITGDIVSPKERLSLK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagacatcgagcacaaccgctttgcgttgggaaaaagcgacagtgttgtcggg
caattggcgacagtacagctcgagaaaggcgattctcttccggatgtggcccggcatttc
ggcctgggtttgcaggaaatcgcggaagccaatccgggaaccgatctttgggtgccggag
tcggggcgcaccctcattctgcctatgcaattcgtggttccggatacggtccggaaaggc
ctcgtggtcaatcttgcggcgatgcgcctgttttatttcccgtccaaaacaagcggcgaa
gtgattacctttccggtcggcatcggccgcgaaggccgctcgacgccgaccggagaaatg
tccatcgtgcggaaggcggcccatccggcatggtatgttccggcgtccattcgcaaggat
catgccctcaagggggatcctcttccggccgtggtgtcgccgggccccgacaacccgctc
ggtgattatgcgatgtatctgagtcgtccgagctatttgattcatggtaccaacaagccg
tacggcatcgggcttcgcgccagcaacggttgtgtccgcttgtatccggaaaatatcgaa
gcgctctaccggcaggttccggtcaagacgccggtacatatcgtcaatcagccttatttg
gtgggctggcgcgacggagaactttatctggaggcccataaaccgcatgaagagctcgat
ggtaagcggctcaaaaaagcgctgatgtctgagctcaagaagatcgaaaagaaagcaggg
cgaaaattggatttaccgcggatcgagcggattttgagcgaggccaggggtattccaata
cccattttcgagaacagcgacaatctcgatcagctcgtcagtaatgcggtggctgtgaaa
tatccggatgagttgttcggtcagccgaaaccgccggcgatgaccgataggggctggtac
atcacggcgctggagtccggtgacgaattgagcgcccgtcgtatggcggcggtgctgaat
catcaggggccgcaaattccggctcgggtggtgcccctggccaatggacgctttagagtg
atcgccggtccgttcaagagtagcagggcgaccaaggaggcggcgaggcggatgaagatc
gatttggacatcacgggcgatatcgtgtcgccgaaagagcgcttgagtctcaaatag
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