Methylocaldum marinum: sS8_2462
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Entry
sS8_2462 CDS
T05638
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai03030
DNA replication
mmai03410
Base excision repair
mmai03420
Nucleotide excision repair
mmai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
sS8_2462
03410 Base excision repair
sS8_2462
03420 Nucleotide excision repair
sS8_2462
03440 Homologous recombination
sS8_2462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmai03032
]
sS8_2462
03400 DNA repair and recombination proteins [BR:
mmai03400
]
sS8_2462
Enzymes [BR:
mmai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
sS8_2462
DNA replication proteins [BR:
mmai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
sS8_2462
DNA repair and recombination proteins [BR:
mmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
sS8_2462
NER (nucleotide excision repair)
GGR (global genome repair) factors
sS8_2462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BBA34414
UniProt:
A0A250KSB8
LinkDB
All DBs
Position
2733729..2736443
Genome browser
AA seq
904 aa
AA seq
DB search
MSEPTEKRLVLVDGSSFLYRAFHALPPLNNSRGEPTGAILGVANMLRKLIGEYDTCHIGV
VFDAPGKTFRDDLFEHYKAHRPPMPDELRSQIEPLHAIIRAMGLPLLVESGVEADDVIGT
LAMKAVGQGYAVVISTGDKDMAQLVNDRVMLENTMFDSRLDIEGVKAKFGVPPECIIDYL
TLVGDTSDNIPGIPKVGPKTAAKWLNQYGSLDGILAHIDEIGGKVGESLRANLDQIPLSR
QLATIKCDVDLPIGPNDLKRTEPDQAALRELLVRLEFNSWLRQLEASGGAEAPTGPAVQT
PARADYETVLNEEQLERWLKKLETAEYFAFDTETTSLDYSRAEIVGLSFAVEPGEAAYVP
VAHDYPGAPVQLSRDAVLEKLRPLLENPDRSKIGQNLKYDTNVLANHGLTLTGIRHDTML
ESYVLNSTATRHDMDSLAELYLNHRTIHYEDVAGKGAKQIPFQQVSVESASEYAAEDADI
TLRLHHHLWPKLEAEASLKTLYESIEVPLVPVLSRMECTGVLVDVYKLAQQSRELEKRML
EIEQEACKAAGCQFNLGSPKQIQTILYDKLNLPVVKKTPTGQPSTDESVLQELAESFELP
RLILDYRSMSKLKSTYTDKLAEQINPRTGRVHTSYHQAVAATGRLSSSDPNLQNIPVRTE
EGRRIRQAFIAPPGRKILAADYSQIELRIMAHISGDPSLRTAFHDNTDVHRFTAAEVFGV
PPDQVTPDQRRSAKAINFGLIYGMSAFGLGKQLGIPTNQAQRYIDLYFARYPDVKGYMET
TRNTAREKGYVETLFGRRLYIPEIASRNAQRRQYAERTAINAPMQGTAADIIKRAMIAVD
AWIRESGHPICMIMQVHDELVFEVADDYADEAAREIGNRMCRAAQLVVPLVVDVGIGSNW
DEAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccaaccgaaaaaagacttgtcctggtcgacggttcttcgttcctgtaccgc
gcgtttcacgccctgccgcccctgaacaactcgcgcggcgagcccaccggcgccattctg
ggcgtcgccaacatgctgcgcaagctgatcggggaatacgacacttgccatatcggcgtc
gtcttcgacgcgcccggcaagaccttccgcgacgatcttttcgaacattacaaggcccac
cgtccgccgatgccggacgaacttcgctcccagatcgaaccgctgcacgccattatccgg
gcgatgggactacccttgctggtggaatccggcgtggaagccgacgacgtgatcggcacc
cttgcgatgaaagcggtcggacagggctatgccgtcgtcatctccaccggcgacaaggac
atggcccaactggtcaacgaccgggtcatgctggagaacaccatgttcgacagccgcctg
gacatcgagggcgtcaaagccaagttcggcgtaccgcccgaatgcatcatcgattacctg
accctggtgggcgacacctcggacaacatccccggcattccgaaagtcggaccgaagact
gcggcgaaatggctgaatcaatacggctcgctggacggcatcctggcccatatcgacgag
atcggcggcaaagtcggtgaaagcctccgcgccaatctcgatcagatccccttgtcgcgc
cagctcgccaccatcaaatgcgacgtggacctgccgatcggaccgaacgatctgaaacgc
accgaacccgatcaggccgccctccgggaactcctggtccgcctcgaattcaattcctgg
ctccggcaactggaggcttccggcggtgccgaagctcccaccggcccagccgtacagacg
ccggcccgagccgattacgaaaccgtcctgaacgaggaacagctggagcgctggttgaaa
aagctggagaccgcggaatacttcgctttcgacaccgaaaccaccagtctcgattacagc
cgggcggaaatcgtggggctctctttcgcggtggaaccgggcgaagcggcctacgtgccg
gtggcccacgattaccccggcgcgccggtccagctcagccgcgacgccgttctcgaaaaa
ctccggcctctgctggaaaatcccgaccggtccaagatcggacagaacctcaaatacgac
accaatgtcctcgccaatcacggactcaccctgaccggcatccgccacgacaccatgctc
gaatcctatgtgctcaacagcaccgccacccggcacgacatggactccctggccgaactc
tatctcaaccaccgaaccatccactacgaggacgtagccggaaaaggcgcgaaacagatt
ccctttcagcaggtcagcgtcgaaagcgcctccgagtacgcggcggaggatgccgacatc
accctgcgcctgcaccatcacctttggccgaagctcgaagcggaagcttcgctcaaaacg
ctctacgagagcatcgaggtcccgctggtgccggtcctgtcccgcatggaatgcaccggc
gtgctggtggacgtgtacaagctggcccagcaaagccgggaactcgaaaagcgcatgctg
gagatcgaacaggaggcctgtaaggcggccggctgccagttcaacctgggatcgcccaag
cagatccagaccatcctgtacgacaagttgaacctgccggtggtcaagaaaacgccgacc
ggacagccgtccaccgacgaatcggtgttgcaggaactggccgaaagcttcgagctgccg
cggctgatcctggattaccggtccatgagcaaactcaagtcgacctataccgacaagctg
gccgagcagatcaatccccgtaccggacgtgtgcacacctcctatcaccaggccgtggcc
gccaccgggcggctgtcgtcctccgaccccaacctgcagaacatcccggtgcgcaccgag
gaaggccgccgcatccgccaggccttcatcgcaccgcccggccgcaaaatcctcgcggcg
gattactcgcagatcgaactcaggatcatggcgcatatctcgggcgatccaagcctgcgc
accgcctttcacgacaataccgacgtccaccgcttcaccgccgccgaagtgttcggcgtg
ccgccggaccaggtcacgcccgaccagcgccgctcggccaaggcgatcaacttcggcctc
atctacggcatgtccgccttcggcctgggaaaacagctcggcatccccaccaaccaggcg
cagcgctacatcgacctttatttcgcccgctatcccgacgttaagggctacatggaaacg
acccgcaacacggcgcgggaaaaaggctacgtggagaccttgttcggccggcgcctatac
attccggaaatcgcttcccgcaacgcccagcgccgccagtatgcggagcgcaccgccatc
aacgcgccgatgcaaggcaccgcggcggacatcatcaagcgcgccatgatcgccgtggac
gcctggattcgggaatccgggcacccgatctgcatgatcatgcaggtacacgatgaactg
gtattcgaagtggcggacgattacgcggacgaagccgcccgcgaaatcggcaatcgcatg
tgccgcgcggctcagctcgtggtgcctttggtggtggatgtgggcatcgggtcgaattgg
gatgaggcgcattga
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integrated database retrieval system
