Methylocaldum marinum: sS8_2692
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Entry
sS8_2692 CDS
T05638
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
sS8_2692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmai03021
]
sS8_2692
03400 DNA repair and recombination proteins [BR:
mmai03400
]
sS8_2692
Enzymes [BR:
mmai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
sS8_2692
Transcription machinery [BR:
mmai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
sS8_2692
DNA repair and recombination proteins [BR:
mmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
sS8_2692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
MOR2-PAG1_mid
Motif
Other DBs
NCBI-ProteinID:
BBA34639
UniProt:
A0A250KXY4
LinkDB
All DBs
Position
complement(2971464..2972459)
Genome browser
AA seq
331 aa
AA seq
DB search
MQTYLANLIKPRLVDVSPIDLNSARIVIEPLERGFGHTLGNALRRVLLSSIPGCAVTEVT
IEGVLHEYSTLDGVQEDVIDILLNLKNLAIRLSSGHEALLRINKSGPGKVTGADIELTHD
AEIVNPELEIANLTHAGKLSMTLKVEKGRGYQPVGSRIGGQTESAVGVLNIDASFSPIRR
VSYLVENARVEQRTDLDKLVLELETNGTVDPEEAVRQAASILNEHLSVFVALKSEETPRI
AEERPQFDPLLLRSVDDLELTVRSANCLKAENIFYIGDLIQRTEVDLLKTPNLGKKSLTE
IKDVLATKGLSLGMRLENWPPEGLKREQQDS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacctacttggcaaatcttatcaaaccgcgcttggtggacgttagtcctatagat
ctgaacagtgcgcgcattgtaatcgaacctttggaaagggggttcggtcataccctcgga
aacgctctcaggagagttttgctttcctcgataccaggttgcgcagtcactgaagtgacc
atcgaaggggttctacatgagtattccaccctcgatggtgttcaggaggacgtgatagac
attcttttgaacttaaagaatctagcgatccgcctttcgagtgggcatgaagccctcctt
aggattaacaaatctggccctggtaaagtaacaggcgcggatatcgaacttacgcacgac
gctgagatcgtgaatccagagctcgaaattgctaatctgacccacgccgggaagctaagc
atgacacttaaggtggaaaaggggcgaggataccagccggttgggtcgagaatcggtggg
cagaccgagtctgcggtcggagtgttgaatattgatgcctcctttagcccaatacggcgg
gtttcgtatctggtagagaatgcgcgtgttgagcagagaacggatcttgataagcttgtt
ttggagctggaaacaaacggcacggttgatccggaagaggctgtcagacaggcagcgtca
attctgaacgagcatttgtcggtatttgttgcgctcaagagcgaggaaacgccgcgaatt
gccgaagaacggcctcaatttgatccgctacttctccgttctgttgatgaccttgaattg
accgtcaggtcggcgaattgcttaaaggcagagaatattttttacatcggtgatctcatt
caaagaactgaagtggatttgctcaagaccccaaatttggggaaaaaatcgcttacggaa
attaaggatgttttagcaacgaagggtctgtcgctaggaatgagactggagaattggcct
ccagaaggactcaaacgtgagcaacaggactcttaa
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