Methylocaldum marinum: sS8_2907
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Entry
sS8_2907 CDS
T05638
Name
(GenBank) response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
Organism
mmai
Methylocaldum marinum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS
PAS_4
Response_reg
PAS_8
PAS_13
Motif
Other DBs
NCBI-ProteinID:
BBA34852
UniProt:
A0A250KTF9
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Position
3190186..3192651
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AA seq
821 aa
AA seq
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MSEPLNVLVIEDSEADFRLIQRQLRLHGLAPRCRRVESGVELNQALEEGGWHAVLSDYNV
PGLDFAEAFGMIQERLPNAPVILISGSIGEERAVELLKLGVWDFVLKDRPGRLGPAIERS
LREMKERRVRHAAEEALRESERRFRQMAETIGEVFWLCSPDFRSVLYLSPAFEQVCGRLR
TELYANPKLWQEIIHPADAPRVLRAQEDLAHGRRFDIQYRIARPDGTLRWINDRGYALRD
DAGKVILASGVALDITEQFQAAERLRQAAAVFTSTQEGVVITDLDGNIIAVNPAFTMITE
YTEAEVLGKNPRLLQSGHHGRDFFQAMWHAIRSAGSWQGELWNRRKSGEIYPQWLNISTV
LNEQGKAVNYVGVFTDITRLKRSETQLEYLAHYDPLTGLPNRLLLLSRLNHALERARRDR
ARGAVLFLDLDRFKNVNDSLGHATGDELLQIASQRMRGCLSESDTLARLGGDEFVVVLED
LSDPETAANVAHSLIDRFNAPFCLSGGQEVYIGASLGISIFPDDGDEPDRLIQYADAALY
QAKDKGRGTYHFYTESLTRSANERLALETRLRRALEQDEFVLHYQPLVALTDGRIFGVEA
LVRWQIPGEGLLYPNHFIPLAEETGLIVPLGEWVLRTACARMKTWLDAGLPLEMLAVNLS
PRQFRQGDLYERIRAVLAETRLPSRYLELEITETALMEDGPENETKLAALKALGVRIAID
DFGTGYSSLAYLKRFPIDKLKIDQSFVRDIPQDTSNMEIAAAIIAMARNLKLEVLAEGVE
AEAQLAFLKRHGCDVAQGYLFGHPVAADAMQATLEAAMGKG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagccgcttaacgtcctggtcatcgaggatagcgaagccgatttccggttgatc
cagcgccagttgcgacttcatgggctggctccccgctgccgccgggtggagagcggtgtc
gagttgaaccaggctctggaggaaggcggctggcacgccgtgttgtcggactacaacgtt
cccggcctggatttcgcagaagctttcgggatgatccaggaacggctgcccaatgcaccg
gtgatcctgatctccggcagcatcggcgaagaacgcgcggtcgaactgctcaagctgggg
gtgtgggacttcgtgctcaaggaccggccggggcggctgggccccgccatcgagcgcagc
ctgcgcgaaatgaaggaacgacgggtgcggcatgccgccgaagaagccctgcgtgaaagc
gagcggcgcttccgccagatggccgaaacgataggcgaagtgttctggctttgttcgccg
gattttcggtccgttctttacttaagtcccgcattcgagcaggtgtgtggacgcctccgc
acagaactctatgcgaatccgaaactttggcaggagatcattcatcccgcggacgctcca
cgggtgttgcgcgcccaggaagatctggcgcacggccggcgcttcgatatccagtaccgg
atcgcccgtcccgacggcacgctgcgctggatcaacgaccgcggctacgcattgcgcgac
gatgccggcaaggtcattctcgcctcgggtgtggccctggacatcaccgagcagttccag
gcggcggaacggctgcgccaggcggccgccgtattcaccagcacccaggaaggcgtggtc
atcaccgacctcgacggcaacattatcgccgtcaatccggccttcacgatgatcaccgaa
tacaccgaagcagaggtcttgggcaagaaccctcggctcctccaatccggacatcacggc
cgtgatttcttccaagccatgtggcacgccattcgcagcgccggctcctggcagggcgaa
ctctggaaccggcgcaagagcggcgaaatctatccgcagtggctgaacatcagcacggta
ctcaacgaacagggcaaggcggtcaactacgtgggcgtgtttaccgacatcacccgcctc
aagcgttcggaaacccagctggaatacctcgctcattacgatccgctgaccggccttccc
aatcggctgctgctgctgtcccgcctgaaccatgccctggagcgcgccaggcgcgaccgg
gcccggggcgccgttttgttcctcgacctggaccgcttcaagaacgtcaacgacagcttg
gggcatgccaccggcgacgaactgctgcaaatcgcctctcaacgcatgcgcggatgcctg
tccgaatccgataccctggctcgcctcggcggagacgaattcgtcgtggtgctggaagac
ctgtccgatcccgagaccgcagcgaacgtcgcgcacagcctgatcgaccgcttcaacgct
ccattctgtttatccggaggacaagaggtttacatcggcgccagtctcggaatcagcatt
ttcccggacgacggcgatgaacccgatcggctgatacagtacgcggatgccgccctctac
caggcaaaagacaagggtcgaggcacctatcacttctataccgagtcgctgacccggtcc
gcgaacgaacggctcgccctggaaacccgcctgcgacgcgctttggaacaagacgagttc
gtcctgcattatcagccgctggtggcattgacggacgggcggattttcggcgtggaggcc
ttggtgcgctggcagattcccggcgagggtctgctctaccccaatcatttcatacccttg
gcggaagaaacaggcctcatcgtgccgctgggcgaatgggtgctgcgcaccgcctgcgcc
cgcatgaaaacctggctggatgccggcctgccgctggaaatgctggcggtcaacctttcg
ccgcgccagttccggcagggcgacctttacgaacgcatccgcgccgtcctagccgaaacc
cgtttgccgtcccggtatctcgaacttgaaatcaccgaaaccgctctcatggaagacggc
ccggagaacgagaccaaactggcagcgctcaaggcattgggcgtcagaatcgcgatcgac
gatttcggcaccggctactcctcgctggcctatctgaaacgtttccccatcgacaagctg
aagatcgaccaaagcttcgtgcgggatataccccaagatacttcgaacatggagatcgcc
gccgccatcatcgccatggcgcggaacctgaaactggaggtattagccgaaggggtggaa
gccgaggcccagctcgcgtttctgaagcgccacggctgcgatgtcgctcagggctattta
ttcggccacccggtcgcggccgatgccatgcaagccaccctggaagcggccatggggaaa
ggatga
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