Methylocaldum marinum: sS8_3252
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Entry
sS8_3252 CDS
T05638
Name
(GenBank) type 4 fimbriae expression regulatory protein
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mmai
Methylocaldum marinum
Pathway
mmai02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
sS8_3252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mmai02022
]
sS8_3252
02035 Bacterial motility proteins [BR:
mmai02035
]
sS8_3252
Two-component system [BR:
mmai02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
sS8_3252
Bacterial motility proteins [BR:
mmai02035
]
Pilus system
Twitching motility proteins
sS8_3252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA_19
HTH_23
HTH_28
AAA_22
VpsR
Motif
Other DBs
NCBI-ProteinID:
BBA35195
UniProt:
A0A250KU68
LinkDB
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Position
3580294..3581640
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AA seq
448 aa
AA seq
DB search
MNRPSALVVDDEPAIRELLEITLARMDIEVLSAGGLRQAKDLLQNRRFDLCLTDMRLPDG
DGLDLVEYIQFNHPALPVAVITAHGNMESAIRALKNGAFDFVSKPLDLQVLRSLINTALK
LAKQEGRDRRSRHILLGDSQKMREIRSKITKLARNQAPIFISGESGTGKELVARLIHAMS
PRSEKPFVAVNCGAIPHDLMESEFFGHKKGSFTGAVGDKQGLFQAAHGGTLFLDEVADLP
LSLQVKLLRAIQEKSVRPLGESREIPVDVRIVSATHKNLAKMVRNGDFRQDLFYRINVIE
MHVPPLRERRSDIPALVDHILGKLTSAGDGKIELSPEALNALLSYPFPGNVRELENILER
AVALCDGHRILADDLNLPETTETASPAAREERPVGEHVLSLENYMDEVEKQAIVKALEKT
RWNRTAAAKQLGVTFRALRYKLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaccttccgctctcgtcgtcgatgacgaacccgccatccgcgaactgctggaa
attacgctcgcgcgtatggatatcgaagtactgtcggccggaggattgcgacaggcaaag
gatctcctgcaaaaccggcgtttcgatctgtgcctgacggacatgagactgcccgacggc
gacgggctggacctggtagagtacatacaattcaaccacccggccctgccggtcgcggtc
attaccgcccacggcaatatggaatcggcgatccgcgccttgaagaacggcgccttcgac
ttcgtctccaagccgctggatctccaagttctgcggagcctcatcaatactgccctcaag
ctcgcgaagcaagaggggcgggatcgccgttcccgccatatcctgctcggcgattcgcag
aagatgcgggaaatccgctccaagatcaccaagctggcgcgcaaccaggcgcctatcttc
atcagcggcgaatcgggcacgggcaaggagttggttgcaaggctcattcatgccatgagc
ccgcgatcggaaaagccgttcgtcgccgtaaactgcggcgcgatacctcacgacctcatg
gaaagcgaatttttcggccacaagaaaggcagttttaccggagcggtgggggacaagcag
ggattatttcaggcggctcacggaggcacgctgtttctggacgaagttgccgacctgccg
ctgtcgctacaggtcaaactcttgcgcgcgatccaggaaaaatcggttcggccgttgggc
gagtcccgagaaatcccggtggacgtacggatcgtgagcgcaacccacaagaatctcgcg
aaaatggtccgaaacggcgatttccggcaagatcttttttaccggatcaacgtgatcgaa
atgcatgttccgcccttgcgcgagcgccgcagcgatattccggccctggtcgatcatatc
ctcgggaagctcacatccgcaggcgatggcaagatcgaactgagcccggaagccttgaac
gcgctcctgagctatccgtttcccggcaacgtgcgcgagctggaaaatattctggaacgc
gcagtcgcactttgcgacggccatcgcattctggccgatgacctgaaccttcctgaaacg
accgaaaccgcttcgccggcggcgagggaagagcgtcccgtcggggaacacgtcctgtcg
ctggaaaactatatggacgaggtcgaaaagcaggcgatcgtcaaagcgctggaaaaaacc
cggtggaaccggacagcggccgcgaaacagcttggggttactttccgcgccttgcgctac
aagctcaaaaagctggggctggactaa
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