Methylocaldum marinum: sS8_3559
Help
Entry
sS8_3559 CDS
T05638
Name
(GenBank) putative rhs-related transmembrane protein
Organism
mmai
Methylocaldum marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PAAR_motif
DUF6531
RHS
OCRE
Tox-PAAR-like
Motif
Other DBs
NCBI-ProteinID:
BBA35496
UniProt:
A0A250KVE4
LinkDB
All DBs
Position
3891600..3896240
Genome browser
AA seq
1546 aa
AA seq
DB search
MALTAEQRIAAVQTQAPDVETGERIATASHTGALAAGAALAAKGGWVGLTAYGAGMAGAY
AGDWAADKLGLAEVAADGLAAFGLRTIGQGGPHPGVVGCQVAHNHGFAGFLATVAVGALA
AVAVGALVVATGGAAAVALIGAAAAGGFAGGLVGGALGGALAQMGARTGPITTGSPDVLI
AGKPVARMTDTAACSKESAPFPLIEGSETIFVNNLPMARVGHRLACGAVLDEGVDSVFMD
HTTVACAEPAPAIPVWGRVLVDWLGILPLGKFAAGLGRRANRTASARAAGTPRHCQTHCG
DPVNVATGEFVEWRTDIDIPGVLPFQLRRSYRTRADAATRSLFGPHWCDSLTVALVRRGA
LIDYHDDEGVCWTFDAPYAVLDAHHLKAPQLVLRGTRDAPELHDRETGARYHFDWQGDSA
RLSRVEDGYGNHYRLHYRRERLVRLEHSDGYTLDFAWRPEGTLGAVWLHEPDGPPVELVR
YQHDARGRLIRSQSDASGHLVYAYDEHHGIIAWGDSGRTSVQLRYDDAGWVTRVDTPHGI
HAACFEYDRPARITRVWLDGACTTYHYTADGLVTRVIDPLGAETVTAWDAYQRKVSETDP
LGRVTRYAYTDEGWLRGITDPCGRTTRFTYDEAGNRLRLETPDGQRWHWTYDAAGNLRTE
QTPDGLVTRLERDARGRLVRHIRPDRSESRFHYDALGRPCGVTAPNGGVTRWAQDRLGRV
FETTDAEGALTRYAYPPRSDDAAPKARGHTAPSRVILANGDTWTYRYDAEGLPDAVTDAA
GHTRQYRWGAYDLLESHSDPLGGVTRYRYDAQARLAAVTNALGQTWRYTYDPAGRCVQET
DFAGRITRYRYDAAGRLLVKTAPDGHDYCYTWDERDRLTRIDAGDSRIDYAYDESGRLTR
AALYRGDTLESETCLRYDPHGRLLEETQGPHRIAWRYDACGRLAGRTTPLGTVAYDYDAL
GLLDALTGPRGEVHVQRDLLGRILQRSSRPFGPDGHPVLVPGPQFHLTQRFDAAGHLLAQ
ALRGDGLPSAQRRYHWQHGRLIGLDDARFGRTRYRYDARDQVLEARYDPGPGYGPTLGGL
SPGPTLQPGVTAETFGYDALGNLCGQHTPQAHADQTYTPAGSVARRGQTEYRYDERGRTT
CRTEHRPGFRPHTWHYRWDAFDRLIQVHTPDGQVWRYTYDAFGRRLAKHCLTPGRAGRRR
PLVEAQYLWDGPNLAVEWRRYGTTDAAAAPTETREWHHEPGTFVPLALAYQREQARPAWL
HVVTDPLGTPRELVSDDGEVVWAGRLRTWGRLDRWAVKDDDTRLARRLPRGYRTAANDPY
IEVDLRFQNQWEDPESGLYYNYQRYYDPDTGQYLSPDPIGLRGGLRPHGYVHNPVGWVDP
WGLAGCPPEGNVPDSAASAIHPGRLAAESSEVSQESIIRALRQSGSVEGAATAKLMKRGD
VNVRLVPTDPWGGGAAGRAPFGSDTVYLSLDKLSSPASAAGVAAHETRHVLQNLTPQTYR
QVHELQAYQWQRAVDPAFNMSDDAISRFIHTHPLYRNVPPSLTGGR
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggcccttaccgccgagcaacggatcgccgccgtccagacgcaagcgccggatgtcgaa
accggcgagcggatcgcgaccgcctcccacaccggcgccctcgccgccggggcggctctc
gccgccaagggcggctgggtcggactgaccgcctacggcgccggcatggccggggcatat
gccggcgactgggcggccgacaagttgggcctcgccgaggtcgccgccgacggcctcgcc
gctttcgggctgcggacgatcgggcagggcggcccccatcccggggtggtcggctgccag
gtcgcccataaccacggcttcgccggcttcctcgccaccgtggccgtgggtgcactggcg
gcggtagcggtcggagcgctggtggttgccaccggcggcgcggccgcggtggccctgatc
ggtgccgccgcggccggcggctttgccgggggactggtgggcggcgccctgggtggggcg
ctggcgcagatgggcgcccgcaccggcccgatcaccactggctccccggatgtgctgatc
gccggcaagccggtcgcgcgcatgaccgataccgccgcctgcagcaaggaatccgcgcct
ttcccgctcatcgaaggcagtgagaccatcttcgtcaacaacctgccgatggcgcgggtg
ggccaccggctcgcctgcggcgcggtgctcgacgaaggcgtcgactcggtgttcatggac
cacaccaccgtcgcctgcgccgagcccgccccggccatcccggtctggggccgggtcctg
gtcgactggctcggcatcctgccgctcggcaagttcgccgcggggctcggccggcgcgcc
aaccgcaccgcctcggcgcgcgccgccggcaccccccgccactgccagacccattgcggc
gatccggtgaacgtcgccaccggcgaattcgtcgagtggcgcaccgacatcgacattcct
ggcgtgctcccgttccagctccggcgcagctaccggacccgcgcggacgcggcgacccgg
agcctcttcggcccccattggtgcgattccctgaccgtcgcactggtgcggcgcggcgcc
cttatcgactatcacgacgacgaaggcgtgtgctggaccttcgatgccccttatgcggtg
ctcgacgcccatcatctcaaggcgccccagctggtactgcggggcacccgcgacgccccc
gaactgcacgatcgcgagaccggcgcccgctatcatttcgactggcagggcgacagcgcc
cggctgagccgggtcgaggacggctacggcaaccattaccgcctgcactatcggcgggaa
cgcctggtgcggctcgaacatagcgacggctacaccctcgatttcgcctggcggcccgag
ggcaccttgggcgcggtgtggctgcacgagcccgacggtccgccggtggaactggttcgc
tatcagcacgacgcccggggccggctgatccggagccaaagcgacgccagcggccacctg
gtctacgcctacgacgagcaccacgggatcatcgcctggggcgacagcggccggacctcg
gttcagctccggtatgacgatgcgggctgggtgacccgagtcgacacgccgcacggcatc
catgccgcctgcttcgagtacgaccgccccgcgcggatcacccgggtgtggctcgacggc
gcctgcacgacctaccactacacggccgacggtctcgtcacccgggtgatcgatcccctg
ggtgcggagaccgtcaccgcctgggatgcctaccagcggaaagtgagcgagaccgacccg
ctcggccgggtcacccgctacgcctacaccgacgaaggctggctccggggcatcaccgac
ccgtgcggccgcaccacccgcttcacctatgacgaggccggcaaccgcctccggctcgag
acgccggacgggcagcgctggcactggacctacgatgccgccgggaatctccgcaccgaa
cagaccccggacggcttggtcacccgcctggaacgggacgcccgcggccggctcgtccgc
cacatccggccggaccggagcgagagccggttccactacgatgccctgggccggccctgc
ggcgtgaccgcccccaacggcggcgtgacccgctgggcccaggaccggctcggccgggta
ttcgaaacgaccgatgccgaaggcgccctgacccgctacgcgtacccgccgaggtccgac
gacgcggcgcccaaggcccgcggccataccgcgccgagccgggtgatcctcgccaacggc
gacacctggacctaccgctacgacgccgagggtctcccggacgccgttaccgatgccgcc
ggccacacccgacagtaccgctggggcgcttacgatctgctggaaagccatagcgacccc
ttgggcggcgtcacccgctaccgctacgacgcccaggcccggctcgccgccgtcaccaac
gccctcggccagacctggcgctacacttacgacccggccggccgctgcgtccaggaaacc
gacttcgccgggcgtatcacccgctatcgctacgatgccgccggccgcctgctggtgaag
accgcgcccgacggccacgactattgctacacctgggacgagcgcgaccgcctgacccgc
atcgacgccggcgacagccgcatcgactacgcctacgacgaatcgggccgcctcacccgc
gccgcgctgtaccggggcgacaccctcgagagcgagacctgcttgcgctacgatccgcac
gggcgcttgctggaagaaacccaagggccgcaccgcatcgcctggcgctacgacgcctgc
ggccgcctcgccgggcgcaccaccccgctgggcacggtggcctacgattacgacgccctg
ggcctgctcgacgccctcaccggcccccggggcgaggtgcatgtccagcgcgacctcctg
ggccgcattcttcaacgcagcagccggcccttcggacccgacggccacccggtcctcgtt
ccggggccgcagttccacctcacccagcgcttcgacgccgcagggcaccttctcgcccag
gcgctccgcggcgacggcctcccgtcggcccagcgccgctaccactggcagcacggccgg
ctgatcggcctcgacgacgcccgcttcggacgcacccgctaccgctacgacgcccgcgac
caggtgctcgaggcccggtacgaccccggcccgggctacggccccacgctcggcggcctc
tcgcccggcccgaccctgcagcccggtgtcaccgcggaaaccttcggctacgatgccttg
ggcaacctctgcggacagcacaccccgcaggcgcacgcggaccaaacctacaccccggcc
ggcagcgtcgcccgccgcggccagaccgagtaccgctacgacgaacgcggccgcaccacc
tgccgcaccgagcaccgcccggggtttcggccgcacacctggcactaccgctgggacgcc
ttcgaccgcctgatccaggtccacaccccggacggccaggtctggcgctacacctacgac
gccttcggccggcgcctcgccaaacactgcctcaccccaggccgcgccggccggcgccgg
cccctggtcgaagcccagtatctctgggacggccccaacctcgcggtcgaatggcgacgc
tacgggacgactgacgcggcggccgcccccaccgaaacccgcgaatggcatcacgagccc
ggcactttcgtgcccctggccctggcttaccaacgcgagcaagcccgccccgcctggctg
cacgtcgtcaccgacccgctcggcaccccgcgggaactcgtcagcgacgacggcgaggtc
gtctgggccggccggctgcgcacctggggccggctcgaccgctgggcggtcaaggacgat
gacacccgcctggcccgccgcctgccgcggggctaccggaccgccgccaacgacccctac
atcgaggtcgatctgcgcttccagaaccagtgggaagacccggaaagcgggctgtactac
aactaccagcgctactatgatcccgacaccgggcaatacctgagtcccgatcccatcggg
ctccggggcggcctccggccgcacgggtacgtgcacaatcccgtgggctgggtcgatccg
tgggggttggcggggtgtccgccggaaggtaatgttccagatagcgctgcttccgccata
catcccggaagattggcggcggaatctagtgaagtatctcaagaatcgattatacgggca
ttgcgtcaaagtggctctgtcgagggtgcagcaacagcgaaactcatgaaacgtggagac
gttaatgtccgtttagtgcctaccgacccatggggaggtggggccgctggtagagcgccg
tttggctcagacactgtgtacttgtcactagacaaactgtcatctccagccagtgcggca
ggcgtagcggcacacgagacaaggcatgtgctacagaacttgacgccacaaacctatcgc
caagttcacgagttgcaagcataccaatggcagagagcggttgatcctgcatttaatatg
tcagatgacgcgatttcacggtttattcacactcatccgctgtatagaaatgtgccaccc
agcttaacgggagggcggtaa
DBGET
integrated database retrieval system
