Methylocaldum marinum: sS8_4458
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Entry
sS8_4458 CDS
T05638
Name
(GenBank) TRAG family protein
Organism
mmai
Methylocaldum marinum
Pathway
mmai03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
sS8_4458
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DUF2062
MLTR_LBD
Vps5
5_nucleotid
Motif
Other DBs
NCBI-ProteinID:
BBA36388
UniProt:
A0A250KXH6
LinkDB
All DBs
Position
complement(4820124..4823309)
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AA seq
1061 aa
AA seq
DB search
MFIPIWKALPSIRKGIPCLLAVMALALFIPGGNIWAAVPQEVLDQAWQIGTRIKEIQDQT
AATNEKKRSDEAAALQPVKEMQAQAGLLKQELAAIRNIYRSDRQALAVVDGKSAGPSNAA
DADVSRAAELRAELAALEARIKEAQAAHQELSKQYAAELSRLSQAKARTELELHQLRAPY
VNDPEGLAEIDTKVTNAQGKQTSAQIAEAKELKRQEEAARAQEKRDAPGREAIQAAQASA
PDRLLGRFEPTSEFEKDVLDAALMNIESNLLKASPRARDQIVQARIKELNEALKAINGKH
AASERSEYPFRAQWLALSKAQFPPNEKTLIEPIRELYRPILTARQEQKAAHARFELIGML
LYFAGNTLSAALVLAAIIWLARRRAQSNDGIVPKFTTFAVDYFKANWLWLIPSLIAMLLN
LLVGLLVLGVAFGVKTFIVSRIQERRHFAWMKAEPQKVIDAWFEELGKTPEQGVSNINRI
FDERKRTLSHALFHNFQDTSQSSNTINAWLFFRISRNLATMEPREREFLRVVELLNALDE
ADTENGWYSWARFGLIWGNGKATADDYSYRMWDREKGVRDGPSAIRWFMEQSDASVDSVI
NAVLQRLEKKAAEANAKPELARLIKDVNKRVRGGTQWLAAEDVDGSAFARKSDFTLRLGL
LDDTDVPLEYSGEGCMVTIAPPRSGKTQCHVFPNLLAWRGPALVLDVKGEIYAGTSKWRT
ENVGPVFRFSPLDPASSHSYNPLSFVRQETDYIWEDSRLLADMMIVPSGASDPFWENKAR
DVLTAAIAYLCYANPPDRRPMDRIIDIIHGGQAWEEMVSGLQMAMDVRSMVQQGTSLAGM
NEKTRDSVLQTAQSSLSAWSGERIRRVTDKSDWSPLDLRDSRHPPTIYICLKPSEVESYT
SLLRVFIAQHIRMLTNKLPPRDSAPILFLLDELPRLRYMPPIEEAIEIGGQYGLRLWLFA
QSLGQLEAAYPNANGMVASCAVRTFMNPSGADGTADRLSEELGYRESVMDGSRQKLVEAT
ELSGPEFQHYQVVMAHGSKPAKVKKAFAWQDAELSARMGSL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtttattccgatttggaaggccttgccttccattcgcaagggtattccttgccttctc
gccgtcatggcattggcgctcttcatcccggggggcaatatctgggccgcagtgcctcag
gaggtgctggatcaggcatggcagatcggcactcggatcaaggagatccaggatcagacg
gccgccacgaatgagaaaaagcgctcggacgaagcggccgcgctgcaacccgtcaaggaa
atgcaggcgcaagccggtctcctaaaacaggaactggcggccattcgcaatatttatcgc
agcgatcgtcaggctctggccgttgtcgacggcaaatcggcggggccatccaacgctgcc
gatgccgatgtctcgcgcgcggccgagttgcgcgcagagctggcggccctggaagcccgt
atcaaggaagcgcaagccgcccatcaggaactcagcaaacagtatgccgctgaattgagc
aggctgagccaggccaaggcccgaaccgagctggaactgcaccaactgcgcgcgccctat
gtgaacgatcccgagggtttggccgagatcgacacaaaagtaacgaacgctcagggcaag
caaacatcggcccaaattgccgaggccaaagagctcaaaaggcaggaagaggccgccagg
gcgcaggaaaaacgcgatgcgcccggccgtgaagccatccaggccgcgcaggctagcgcc
cccgatcgtctgctgggccgcttcgagccgacgtcggaattcgagaaagacgttcttgac
gccgccctcatgaacatagagagcaacttgctgaaagcctcgccgcgcgccagggaccag
atcgtacaggctcgcatcaaggagctcaacgaagccctgaaggctatcaacggcaagcac
gcggcctcggaacgaagcgaatatccgttcagggctcaatggctggccttatccaaagcg
caatttcccccgaacgaaaaaacgctgatcgagcctatccgcgaactataccggccgatt
ctgactgcccggcaagaacagaaggcggcgcacgccagatttgaactcatcggtatgctg
ctctatttcgccggaaatacgctgagtgccgcattagtgctggccgcaatcatctggctg
gcgcgcaggcgcgcgcagtcgaacgacggcatcgtgccgaaattcacgactttcgccgtc
gattacttcaaggccaactggctctggctaatcccgagtctaatcgccatgctgctcaat
ttactcgtcgggctgctggtattgggcgtggctttcggcgtgaaaacgttcatcgtctcg
cggatccaagagcgccggcactttgcgtggatgaaggcggaaccccagaaagtcatcgac
gcatggttcgaggaactcggcaagacgcccgaacagggggtttccaatatcaaccgcatc
ttcgacgagcgaaagcgcacgctcagccacgcccttttccacaacttccaggatacttcc
cagagcagcaacaccatcaacgcctggctgtttttccgcatcagccgcaatctcgccacc
atggagccgcgagagagggagtttctgcgggtggtggaactgctgaacgcgctggacgag
gcggacaccgaaaacggctggtacagctgggcgcgcttcggcctgatctggggcaacggc
aaggccacggcggacgattacagctaccggatgtgggacagggaaaagggtgtgcgcgac
ggtcccagtgccattcgctggttcatggagcagtcggacgcctcggtggatagcgtaatc
aacgccgtgctgcaacgcctggaaaagaaggccgccgaggcgaatgccaaacccgaattg
gcccggttgatcaaagacgtgaacaagcgcgtgcgcggcggcacccagtggctagccgcc
gaggacgtggacggttcggccttcgcccgcaagagcgatttcacactgcgactggggctg
ctggacgacaccgacgtgccgctggaatattccggcgagggctgtatggtcactatcgcg
ccgccgcgctccggcaagacccagtgccacgtgtttcccaacctgctggcgtggcgcgga
ccggcgctggtactggacgtgaagggcgagatttacgccggcaccagcaagtggcggacg
gagaacgtcggaccggtattccgcttcagcccgctggatccggccagcagccacagctat
aacccgctgagcttcgtgcgccaggaaaccgactacatctgggaagactcccgcctgctg
gcggatatgatgatcgtgccctccggcgcgtccgacccgttctgggagaacaaggccagg
gacgtgctgaccgccgccatcgcctacctgtgctacgccaacccgccggaccggcggccc
atggaccgcatcatcgatatcatccacggcggtcaggcctgggaggaaatggtgtccggc
ttgcagatggcgatggacgtgcgcagcatggtgcagcagggtacatcgctggccggcatg
aacgagaagacccgggacagcgtgctgcagaccgcgcagtccagcctcagcgcctggagc
ggcgagcgcatacggcgagtgaccgacaagtccgactggagtccgctggacctgcgcgac
agccggcatcctcccaccatctacatctgtcttaaacccagcgaggtggaaagctatacc
tcgctgctgcgggtgttcatcgcccagcacatccgcatgctcaccaacaaactgccgccg
cgcgacagcgcgcccatcctgttcttgctggacgaactgccgcggctgcgctacatgccg
ccgatcgaagaagctatcgaaatcggcggccaatacggcctgcgcctgtggctgttcgcc
cagagcctggggcagctggaagccgcctaccccaatgccaacggcatggtggccagctgc
gcggtgcgcacgttcatgaatcccagcggcgccgacggcaccgccgaccggctttccgag
gaactcggctaccgcgagagcgtgatggacggcagtcgccagaaactggtggaagccacc
gagctgagcggaccggagttccagcactaccaggtggtcatggcccacggcagcaagccg
gccaaggtgaagaaggctttcgcctggcaggatgccgagctgagcgcgcgcatgggcagc
ctgtag
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