Methylocaldum marinum: sS8_4680
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Entry
sS8_4680 CDS
T05638
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
sS8_4680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmai03019
]
sS8_4680
03110 Chaperones and folding catalysts [BR:
mmai03110
]
sS8_4680
03029 Mitochondrial biogenesis [BR:
mmai03029
]
sS8_4680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmai04147
]
sS8_4680
Enzymes [BR:
mmai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
sS8_4680
Messenger RNA biogenesis [BR:
mmai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
sS8_4680
Chaperones and folding catalysts [BR:
mmai03110
]
Heat shock proteins
HSP60 / Chaperonin
sS8_4680
Mitochondrial biogenesis [BR:
mmai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
sS8_4680
Exosome [BR:
mmai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
sS8_4680
Exosomal proteins of other body fluids (saliva and urine)
sS8_4680
Exosomal proteins of breast cancer cells
sS8_4680
Exosomal proteins of colorectal cancer cells
sS8_4680
Exosomal proteins of bladder cancer cells
sS8_4680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
BBA36610
UniProt:
A0A250KY93
LinkDB
All DBs
Position
complement(5071089..5072717)
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVRFSDDARHRMLAGVNVLADAVKQTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVREGLKSVAAGANPMDIKRGI
DQAVGVVIEDLKKLSKPCTDSKAIAQVGTISANSDESIGKIIADAMDKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINQQETMSVELETPYILLYDKKISNIRDLLPLLEKV
AKSGRSLLIVAEDVEGEALATLVVNTMRGIIKVCAVKAPGFGDRRKAMLEDIAILSGGRV
ISEELGLNLEKVELTDLGSAKKVQVNKENTTIVDGAGKPEDIKARVDQIRKQIEDTTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVAFI
RAQKSLKDLQAKNHDQNVGIAILRRAIEEPLRQIVTNAGEEASVVLSRVQDGEGTFGYNA
ATGEYGDMIQLGILDPTKVTRSALQNAASVAGLMLTTEAMVAEQPKKEKGAGMPGAGMDD
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtccgtttttccgatgacgcccgtcaccgcatgctcgccggcgtt
aacgttctggccgacgccgtgaaacagactctgggtccgaaaggccgcaacgtcgtgctc
gaaaaaagcttcggcgcgccaaccgtcaccaaagacggcgtttcggtcgcgaaagagatc
gagctgaaagacaaattcgaaaacatgggcgcccagatggtgaaggaagtcgcctcgaag
acttccgacgtcgccggcgacggcaccaccacggcgaccgtcctcgctcaagccatcgtc
cgcgaaggtttgaaatcggtagccgcgggcgccaacccgatggatatcaaacgcggtatc
gaccaagccgtcggcgtggtgatcgaagacttgaagaaactttccaagccttgcaccgac
agcaaagcgattgcccaagtcggtaccatctccgccaactccgacgaaagcatcggcaag
atcatcgccgatgccatggataaggtgggcaaagaaggcgtgatcaccgtcgaggaaggt
tccggcctggaaaacgaactcgacgtcgttgaaggcatgcagttcgaccgtggttacctc
tcgccctatttcatcaatcagcaggaaaccatgagcgtcgagctcgaaaccccttacatc
ctgctgtacgacaagaaaatttccaacatccgcgacctgctgccgctgcttgaaaaagtg
gcgaaatccggccgttcgctgttgatcgtcgccgaggatgtcgaaggcgaagcactggcc
acgctggtggtcaacaccatgcgcggcatcatcaaggtttgcgccgtcaaggcgccgggc
ttcggcgaccgccgcaaggccatgttggaagacatcgcgatcctcagcggcgggcgcgtc
atttccgaagagctgggcctgaacctcgagaaggttgaactgaccgatctcggcagcgcg
aagaaggtgcaagtcaacaaggaaaacaccacgatcgtcgatggcgccggcaagcccgaa
gacatcaaggcacgcgtcgaccagattcgcaagcagatcgaagacaccacgtcggactac
gatcgcgaaaagctgcaggaacgtgtagccaaactggcgggtggcgttgccgtaatcaaa
gtcggcgcggctaccgaggtcgagatgaaggaaaagaaagcccgtgtggaagatgcactg
cacgcgacccgcgccgcggttgaagaaggaatcgttccgggtggcggtgtcgccttcatc
cgcgcgcagaaatccctgaaagacctgcaggccaagaaccacgaccagaacgtcgggatc
gccattctacgccgtgcgatcgaagaacctctgcgtcaaatcgtcaccaatgccggcgaa
gaggcttcggttgtcctgagccgggttcaggatggcgaaggcaccttcggctacaacgct
gctaccggcgaatatggcgatatgatccaactgggtatcctggacccgaccaaggtcacc
cgttcagctttgcagaacgctgcgtccgtggccggcctgatgcttaccaccgaagccatg
gtggccgagcagccgaagaaggaaaaaggtgccggcatgcctggagccggaatggacgac
atgatgtaa
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integrated database retrieval system
